Citrus sinensis (Valencia orange): 102621753
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Entry
102621753 CDS
T02983
Name
(RefSeq) receptor homology region, transmembrane domain- and RING domain-containing protein 1-like
KO
K15692
E3 ubiquitin-protein ligase RNF13 [EC:
2.3.2.27
]
Organism
cit
Citrus sinensis (Valencia orange)
Brite
KEGG Orthology (KO) [BR:
cit00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cit04121
]
102621753
Enzymes [BR:
cit01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
102621753
Ubiquitin system [BR:
cit04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
102621753
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
PA
zf-RING_11
zf-C3HC4
zf-C3HC4_2
zf-RING_UBOX
zf-C3HC4_3
zf-rbx1
zf-RING_5
zf-ANAPC11
Prok-RING_4
zf_RING_Vps8
zf-RING_4
Motif
Other DBs
NCBI-GeneID:
102621753
NCBI-ProteinID:
XP_052296427
LinkDB
All DBs
Position
5:complement(join(18088848..18089252,18089883..18089989,18090097..18090507,18090602..18090835,18090915..18091050))
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AA seq
430 aa
AA seq
DB search
MRNPLKFVIKLFIHLCFFVSLAFASIVWKPLSVHFPDLPAISAFSVADVNGSSICGALHE
ADPLNGCSPLSNAVVASNETNKTNFVLMIRGQCNFSYKIQNAQAAGYDAAIVYAHRKKSP
LIYMTYPEGANVPAFYVTLETGAYSKEHDRGEAGECCIFPLSYAWNKHVEKIIVWGMLLL
FVISIPLLFWFARKLYPIDSPRRHRPEQTRQLPRSTVNALPSFVFSSVTSVRCHGRETLC
SICLEDYREGENLRVLPCRHEFHSSCVDSWLIRWGTFCPVCRHEIRRSTSNEGNEQAQRR
VLYCLTIFVSVWVCSGGLHQCGENEANMIIKAFPIMIQRYEAQQVYNPSCQNFLVITLNT
ITGQVIFHLHHVVPLIFCHFDIMFLRLNLSSSILLNWFLVVLNDLHSLMFQWNCSFEDTD
KKHCWLTMAI
NT seq
1293 nt
NT seq
+upstream
nt +downstream
nt
atgagaaaccccctcaaatttgtcataaaactttttatacacctctgcttttttgtttca
ttagcattcgcctctattgtttggaaacccctctctgtccacttccctgaccttcctgcc
atttccgccttttccgttgctgatgttaatgggtcgagcatatgcggagctctccatgaa
gcagatccactgaatggttgttccccattaagcaacgctgttgttgcctctaatgaaact
aataaaactaacttcgttttaatgattagagggcagtgtaatttcagctataaaattcaa
aacgctcaagccgcaggatatgatgcagcaatagtttatgcccacagaaaaaaatctcca
ttaatttacatgacatatcctgagggtgcaaacgtgcctgcattttatgttacattggaa
actggtgcttattcaaaggagcatgataggggcgaagctggggaatgctgcatttttcca
ctgtcttatgcttggaacaagcatgttgagaaaataattgtttggggcatgttgttactt
tttgttatttcgatcccattattattctggtttgcgcgtaagctttatcccattgacagt
ccccggaggcataggccagaacagactcggcagctacctagaagtacagtgaatgcacta
ccttcctttgtgttcagctctgtgacttcagttcgctgtcatggcagagaaacattgtgt
tccatttgcctcgaggactatcgagagggggaaaatctcagggttcttccctgcagacat
gagttccattcaagctgtgttgactcatggctgattaggtggggaacgttctgtcctgtg
tgcaggcatgaaattagaagatcaaccagtaacgagggtaatgagcaggctcagcgacgg
gtgttgtattgccttacaatatttgtttctgtatgggtttgtagtggtggcttgcatcaa
tgcggtgaaaatgaagccaacatgatcataaaagcctttccaataatgattcaaagatat
gaagcgcagcaagtctataaccccagttgtcaaaacttcctagttataactttgaataca
attacaggacaagtgatatttcatttgcaccatgttgttccccttattttctgtcatttt
gacattatgtttctgcgactgaacctttcttcttcaattcttctgaattggtttctggtt
gttcttaatgatcttcatagcctaatgtttcagtggaattgtagttttgaagatactgat
aaaaaacactgctggttaacaatggctatctag
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