Citrus sinensis (Valencia orange): 102621782
Help
Entry
102621782 CDS
T02983
Name
(RefSeq) polygalacturonase-like
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
cit
Citrus sinensis (Valencia orange)
Pathway
cit00040
Pentose and glucuronate interconversions
cit01100
Metabolic pathways
Module
cit_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
cit00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
102621782
Enzymes [BR:
cit01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
102621782
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
NosD
Motif
Other DBs
NCBI-GeneID:
102621782
NCBI-ProteinID:
XP_006478562
LinkDB
All DBs
Position
3:complement(join(33514840..33515064,33515165..33515393,33515490..33515779,33515906..33516355))
Genome browser
AA seq
397 aa
AA seq
DB search
MSTSTSLPISSLTFLLILFFSSSLAIPLSYNVLSFGARPDGRTDSAKSFLAAWAKACGSA
EASTIYVPPGRYLLHNAVFQGQCKNNDITIRIDGTLVAPADYHVIGNAENWILFEHVNGV
SINGGVLDGQGAGLWACKKSDNSNCPSGATTLRFTNSNNVVINGLASVDSQKFHIVINGC
NHVKVQGVKVSASGDSPNTDGIHVQSSSGVTILDSKIGTGDDCVSVGPGTTNLWIENVAC
GPGHGISIGSLGKEQQEAGVQNVTVTAVTFTGTKNGVRIKSWGRPSNGFARNILFQHALM
NNVDNPIIIDQNYCPDNNNCPGQASGVKISDVIYQDIHGTSATEVGVKLDCSSKNPCSGI
SLEDVKLIYKHQPAEASCANADGSASGFILPNSCLKT
NT seq
1194 nt
NT seq
+upstream
nt +downstream
nt
atgtcaacatcaacgtctttgcctattagttctttaacatttcttttgattctcttcttt
agttcatctttagcaattcccttgagttacaatgtgctgagctttggagccagacccgat
ggccggactgactcagcaaaatcctttcttgctgcatgggctaaagcctgtggctcggcg
gaggcctcaaccatttacgtgccaccggggaggtacttactacacaatgctgtgtttcag
ggccaatgcaagaacaatgatattaccatacgtattgacgggactctggtggctccagct
gattatcatgttattggaaatgccgaaaactggattttatttgagcatgttaatggggtt
tctattaatggcggcgttcttgatggccaaggtgctggcttgtgggcttgtaaaaagtca
gacaatagtaattgccccagtggcgctacgacacttcgctttaccaactcaaacaacgtt
gtgattaacggattagcatccgtagatagccagaaatttcatattgtcatcaacggatgc
aaccatgtgaaagtacaaggggtcaaagtttcggcctccggtgacagccccaacaccgat
ggcattcacgttcaatcatcaagtggtgtcacaattttggactcaaaaattgggactggt
gatgattgtgtatcagttggcccaggcaccaccaatttatggattgagaatgtcgcttgt
ggccctggccatggtattagcattggcagcttaggcaaagagcaacaagaggctggagtg
caaaatgtgacagtaacagctgtgacatttacaggcactaaaaatggagtgaggattaag
tcctgggggagaccaagcaatggatttgccaggaacattcttttccaacacgctcttatg
aacaatgtcgataatccaatcataattgatcaaaattactgccctgacaacaacaattgc
cctggacaggcttcaggggttaaaatcagtgatgttatatatcaagatattcatggaact
tcggcaacggaagttggagtaaagctcgactgcagttcgaagaatccatgcagtggaatt
agcttggaggatgtgaagctcatttacaagcatcaaccagctgaagcttcctgtgccaac
gctgatggatcggcctctggatttattctgccaaatagttgcttgaagacttga
DBGET
integrated database retrieval system
