Citrus sinensis (Valencia orange): 102621826
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Entry
102621826 CDS
T02983
Name
(RefSeq) polygalacturonase
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
cit
Citrus sinensis (Valencia orange)
Pathway
cit00040
Pentose and glucuronate interconversions
cit01100
Metabolic pathways
Module
cit_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
cit00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
102621826
Enzymes [BR:
cit01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
102621826
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Beta_helix
NosD
Motif
Other DBs
NCBI-GeneID:
102621826
NCBI-ProteinID:
XP_006489275
UniProt:
A0A067GHS6
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All DBs
Position
1:complement(join(22315008..22315226,22315324..22315552,22315688..22315977,22316083..22316535))
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AA seq
396 aa
AA seq
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MAKFLISLIFSIFLFTVSNNLNPSAATSSVYNVLRFGAKGNGVIDSTEAFAKAWAAACAS
NESTIIYVPKGRYLLGSVAFKGECQSSDITFQIDGTLVAPADYRVLGQADNWLSFEGVSG
VSIIGGALDAKGTSLWACKAAAGTTCPNGATTLSITNSNNVSIKGLLSLNSQMYHIVINR
CQDVLVEGAKIIAAGDSPNTDGIHIQQSRNVKIRSSSIKTGDDCISIGRGTNNLWIERVT
CGPGHGISIGSLGKDMDEEGVQNVTVWKTVFTGTQNGLRIKSWARPSNGFVKGVRFIDAV
MQNVQNPIIIDQNYCPHNLNCPGQVSGVKISDIIYWNIRGTSSTPIAIKFNCSAKYPCEG
IRLYKVNLSYLKLVAQSSCNNVIGKALGIVQPNTCL
NT seq
1191 nt
NT seq
+upstream
nt +downstream
nt
atggctaagttcttaatcagtcttattttttccatatttcttttcactgtctctaataat
ttaaacccatcagcagcaacatcatcggtttataacgtgctaaggttcggagccaaaggc
aatggtgtgatagattccacagaagcatttgccaaagcatgggctgcagcttgtgcctcc
aacgaatcaacaataatatatgtaccaaaaggaaggtatctgctaggctcagtggcattc
aaaggtgaatgccaaagctcagatattactttccagattgatggaacccttgtggctcca
gcggattaccgtgtgctgggtcaagctgacaattggcttagctttgaaggagtcagcggt
gtttccatcattggtggggcactcgatgccaagggaacttcgttgtgggcttgcaaggcc
gccgcaggcactacctgtcccaacggagccacgacattgagcattaccaactccaacaac
gtcagcatcaaggggctcttgtcattaaacagccagatgtaccacattgtgatcaatcgt
tgccaggacgtgctcgttgaaggagcgaagatcatagctgcaggcgacagcccaaacaca
gatggtatacacatccagcaatctagaaatgtgaagattaggagctcctcaatcaaaact
ggggatgattgcatttccattggccgtggcaccaacaacttgtggattgaacgcgtcaca
tgcggccctggtcatggcattagtattggaagcctaggtaaagatatggatgaggaaggt
gtgcaaaatgtgacagtttggaagacggtttttactggtacccaaaatggtctgaggata
aagtcgtgggcaaggcccagcaatggatttgtaaaaggtgttcgcttcattgatgctgtc
atgcagaatgttcaaaatcccattatcatcgaccaaaattactgccctcataatttaaat
tgtcctggccaggtgtcaggagtaaaaattagtgatatcatttattggaatattcgagga
acatcatctacaccaattgccataaaatttaattgtagtgccaaatatccttgtgaaggg
ataagattgtataaagtgaatttaagctacttgaagctggtggctcaatcatcttgtaat
aatgtaattgggaaggcgctcggcatagttcaacccaatacttgtttatag
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