Citrus sinensis (Valencia orange): 102621840
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Entry
102621840 CDS
T02983
Name
(RefSeq) E3 ubiquitin-protein ligase HEL2
KO
K22381
E3 ubiquitin-protein ligase ZNF598 [EC:
2.3.2.27
]
Organism
cit
Citrus sinensis (Valencia orange)
Brite
KEGG Orthology (KO) [BR:
cit00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cit04121
]
102621840
Enzymes [BR:
cit01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
102621840
Ubiquitin system [BR:
cit04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
102621840
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAH_ZNF598
zf-C2H2_13
zf-C3HC4_3
Motif
Other DBs
NCBI-GeneID:
102621840
NCBI-ProteinID:
XP_006492393
LinkDB
All DBs
Position
3:join(46492641..46492808,46493387..46493686,46494000..46494208,46494318..46494366,46494481..46494570,46494716..46494778,46494914..46496536)
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AA seq
833 aa
AA seq
DB search
MDDSCAVCADTLEWVAYGGCGHREVCSTCVARLRFICQDRRCCICKTENNVVFVTKALGD
YTRMISDFSVLPTELREGRVGSYWYHEDTQAFFDDVDHYKMIKAMCRLSCSVCDNMEGPN
DGSKRRARFRNIEQLKGHLFHRHKLLMCSLCLEGRKVFICEQKLYTRAQLNQHINSGDSV
VDGTESERGGFMGHPMCEFCRTPFYGDNELYTHMSTEHYTCHICQRQHPGQYEYYKNYDD
LEIHFRRDHFLCEDEACLAKKFVVFQSEAEMKRHNAIEHGGRMSRAKRNAALQIPICFRY
RRNNEQEHRRGRGRTFHRESSDVNELSMAIQASLETVGADSTSYDPSSSRSLVSDHGDAE
DIDTLIQPFESLATTDSELASRYLQALGQNSRTAPLEESSFPPLPMASSSSQQNPRSNSE
GLPNSMAAHLRRKNNRNVTVLHAGLGWPSASQRPVLSSNNSTQPRRAANIGSAVSQSSSG
SRTVSCKAASAQAQVLAQSTAVSSASSRNSGNIRRITHSASAPNLANGSVEPSVSDFPPV
SAMRTDKMPSISQPAPSVENIQAANRSLVERMRAAFEYDEDKYTAFKDITAQYRQGLIDT
RKYLEYVKQYGLSHLVLELARLCPDALKQKELIETYNATLQGNNQLDNDWAHISVRAKDT
NGSKKSKGKSVATEACKNDKGKSTVANDSNSKHAVANNFLSTVRELQSSFKPSEEDEEVL
SKDGYRGAKGKSKPMVDEQLRGQNDLTSAGGGSSQTSVDRGGGGKQRKKTSKFHRVRLGD
GSMAALLDLKNSDTGPDPEPLDSRLDGNQNPAEGLPVPVRGVWKRGGGHKLFS
NT seq
2502 nt
NT seq
+upstream
nt +downstream
nt
atggacgatagctgcgcggtgtgtgccgatactttggaatgggttgcgtacggggggtgc
ggtcatcgagaagtgtgttcgacatgcgtggctcggctccgattcatttgccaggaccgc
cgttgctgcatctgcaagaccgaaaacaacgtcgtttttgtcaccaaggctttaggtgac
tataccaggatgatcagtgacttctcagtcttgccaactgaattgagggaaggccgagta
ggttcatactggtatcacgaggacacacaggcattttttgatgatgttgatcactacaag
atgatcaaggcaatgtgccggctttcatgtagtgtgtgtgacaacatggagggaccaaat
gatgggtcaaagcgacgggctaggtttagaaatattgagcagttgaagggccatttattt
catcgacataaattgcttatgtgcagtctatgtttggaaggacgaaaggtatttatttgt
gaacaaaaattatatactagagctcaattgaatcaacatataaactcaggtgattcggtg
gttgatggaactgaaagtgaaagaggcggctttatggggcatcctatgtgtgaattttgt
agaaccccgttctatggggataatgagctgtatacacatatgtccacagaacactatact
tgtcatatatgccaaaggcagcatccaggtcaatatgaatattacaagaattatgatgac
ctagagattcactttcgtcgagatcattttctctgtgaggatgaagcgtgtcttgccaaa
aagtttgtcgtctttcaatctgaagcagagatgaagaggcataatgcaattgaacatggt
gggcgtatgtctcgtgctaaacgtaatgcagctcttcagatcccaatttgctttcgttat
cgtcgaaataatgaacaagaacatcgtcgtggaaggggacggacatttcatcgcgagtca
tctgatgttaatgaactttctatggccattcaggcaagcctggagacagttggtgctgat
agcacttcttatgatccatcatcttccagatcactagtctctgatcatggagatgcagaa
gatattgatacactcattcagccatttgaatcattggcaacaaccgattctgaattagct
tcaagataccttcaagccttgggtcaaaactcaaggacagcacctctggaagagtcttct
tttcctccccttcccatggcttccagcagcagtcaacaaaatcccagaagtaattcggaa
ggtttgcctaatagcatggcagcacatctgcggcgcaaaaataacagaaatgtaactgtt
ctccatgcaggccttggttggccatcagcaagtcaaaggcctgtgctatcatctaataac
tcaacccaacctaggcgtgcagcaaacattggatctgctgtgtcacaaagttctagtggt
agccgtactgtgtcgtgtaaagcagcttctgctcaggctcaggtactggcccagtcaaca
gcagtttcatctgcttcttcaaggaactcaggcaacatcagaaggataacccactctgca
tcagctccaaatcttgcaaatggatcagtagaaccttctgtttctgatttccctccggtt
tctgcaatgagaactgacaaaatgccttcgataagccagcctgcgccgagtgttgagaat
attcaagctgcaaacagatctttggtagaaaggatgcgtgctgcttttgaatatgatgaa
gacaaatatactgcttttaaagacataactgcacagtaccggcaaggtttgattgacacg
agaaaatatctggaatatgtgaagcaatatggcttgtcacatttagttcttgagttggcc
aggctctgtcctgatgctctgaaacagaaagagttgatcgagacctacaatgctactttg
caagggaataatcagttagacaatgattgggctcacatcagtgtccgggcgaaagatact
aatggcagcaaaaaaagcaaagggaagtctgtggctactgaagcctgtaaaaatgataaa
gggaaatctaccgtggctaatgacagtaattctaagcatgcagtagcgaataatttttta
agcactgttagggaactgcaatcaagtttcaaaccttcagaagaagacgaggaggtattg
tctaaggatggatatcgtggtgctaaaggaaaatcaaaaccaatggtggatgagcagctt
aggggtcagaatgacttgacatctgctgggggtggatctagtcaaacttctgtggatagg
ggtggtgggggaaagcaacggaagaaaacctcaaagttccacagagtacggcttggtgat
ggctcaatggctgcacttttggatctaaaaaattctgatactggacctgatcctgagcca
ttggacagcaggttagatggcaaccagaatccagctgaaggattaccagtccctgtgcgt
ggtgtttggaaaaggggtggaggtcacaaactcttctcttaa
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