Citrus sinensis (Valencia orange): 102622113
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Entry
102622113 CDS
T02983
Name
(RefSeq) polygalacturonase
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
cit
Citrus sinensis (Valencia orange)
Pathway
cit00040
Pentose and glucuronate interconversions
cit01100
Metabolic pathways
Module
cit_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
cit00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
102622113
Enzymes [BR:
cit01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
102622113
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Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Beta_helix
Motif
Other DBs
NCBI-GeneID:
102622113
NCBI-ProteinID:
XP_015389021
UniProt:
A0A067DFA5
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Position
1:complement(join(22310094..22310312,22310407..22310635,22310742..22311031,22311143..22311598))
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AA seq
397 aa
AA seq
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MERLFSSLFSSLFIILFILSINLASSYATTTTYNVLSFGAKGNGVTDSTQAFAKAWAAAC
ASTESATLYVPKGRYLLGSVAFNGDCKSSDITFRIDGTLVAPADYRVLGQADNWLSFEGV
SGVSIIGGALDAKGSSLWACKASGTNCPDGATTLSFTNSNNIRINGLLSLNSQMFHIVIN
GCKDVHVEGVTVIAPGNSPNTDGIHVQLSMNVKITNCTIKTGDDCIPIGPGTKNLWIERV
TCGPGHGISIGSLAKDLVEEGVQNVTVFKTVFTGTTNGFRIKSWARPSNGFVQGVRFIDA
VMRNVQFPIVIDQNYCPHNLNCPGQVSGVKISDVIYQDIRGTSATPIAIKFDCSPKYPCQ
GIRLQNINLRHLKQEAQSSCNNVIGKALGLVQPNSCL
NT seq
1194 nt
NT seq
+upstream
nt +downstream
nt
atggagaggcttttcagttcgcttttcagttctcttttcataattcttttcattttgtca
attaacttggcctcatcatatgcaacaacgacaacttataatgtgttgagttttggtgcc
aaaggcaatggtgtcacagactccactcaagcatttgccaaagcatgggctgcagcttgt
gcctccacagaatcagccacattatatgtaccaaaaggaaggtatctgctcggctctgtg
gcattcaatggtgattgcaaaagctcagatataactttccggattgatggaacccttgtg
gctccggcggattaccgtgtactgggtcaagctgacaattggcttagctttgaaggagtc
agcggcgtttccatcatcggtggggcactcgatgccaagggatcttccttgtgggcatgc
aaggcttcaggcactaattgtcccgatggagccacgacattgagctttaccaactccaac
aacatcaggatcaatggactattgtcgttaaacagccagatgtttcacatcgtgatcaac
ggctgtaaggacgtgcacgttgaaggagttaccgtcatagcaccaggaaacagccccaac
acagacggtatccacgtccagttgtcaatgaatgtgaagatcacgaactgcactatcaag
acaggcgatgattgtatccccattggccctggcactaagaacttgtggattgaacgtgtc
acttgcggccctggtcatggcattagcattggaagcttagcgaaagatttggtcgaggaa
ggggttcagaatgttaccgttttcaaaacagttttcactggaaccacaaatgggtttaga
ataaagtcctgggctaggcccagcaatggatttgtgcaaggcgttcgtttcatcgatgct
gtcatgcgaaatgttcaatttcccattgtcatcgaccaaaattactgtcctcacaactta
aattgtccgggtcaggtatctggagtaaaaattagtgatgtcatatatcaagatattcga
ggaacatcagctacgcctatcgctataaaatttgattgtagcccaaaatatccttgccaa
ggaataagattgcagaacataaatttaaggcatttaaaacaagaagctcaatcatcttgt
aataatgtaattggaaaagcactgggtttagtccaacccaatagttgtttgtaa
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