Citrus sinensis (Valencia orange): 102622239
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Entry
102622239 CDS
T02983
Name
(RefSeq) E3 ubiquitin-protein ligase RING1 isoform X1
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
cit
Citrus sinensis (Valencia orange)
Brite
KEGG Orthology (KO) [BR:
cit00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cit04131
]
102622239
04121 Ubiquitin system [BR:
cit04121
]
102622239
Enzymes [BR:
cit01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
102622239
Membrane trafficking [BR:
cit04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
102622239
Ubiquitin system [BR:
cit04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
102622239
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Zn_ribbon_19
zf-RING_2
zf-C3HC4_2
zf-RING_11
zf-C3HC4
zf-RING_UBOX
zf-rbx1
zf-ANAPC11
zf-Nse
Anti-TRAP
zf-RING_5
zf-RING_16
DUF7560
Zn_ribbon_6
zf-C3HC4_3
Rad50_zn_hook
HypA
Prok-RING_1
EHMT1-2_CRR
Motif
Other DBs
NCBI-GeneID:
102622239
NCBI-ProteinID:
XP_006472751
UniProt:
A0A067GPX7
LinkDB
All DBs
Position
5:join(32843299..32844337,32844491..32844528)
Genome browser
AA seq
358 aa
AA seq
DB search
MSLSPPRIRINGANDANGDGNGNGANRNYPLYWCYQCHRAVRISSTNPSEIACPRCSGHF
VSEIEISRPRLVVDFTAFDPSPEARLLEALSLILDPPIRRFDHGLFDDQEEPTQARRRSW
FRRRNVNIDQEPGIGRSNVHRRPRRNRSFDGNTNEETDALPRPRTWIILRHAEPPNLLEP
ILRPGQNPLPPAVNPRDYFLGQGMQQLIEEITQNDRPGPPPVPEAAIQAIPTVEIMESHL
ANDNTCPVCKEEFKVGGEARELACKHIYHSECIVPWLRLHNSCPVCRHEVPVSSASSSHD
VDSDDEHGDGARRRCLRLRQLAFLWPFRSRYNQRINPEGDNIASSQAENSGWRHCGIL
NT seq
1077 nt
NT seq
+upstream
nt +downstream
nt
atgtctttgagcccacctagaataagaatcaacggcgccaacgatgctaatggggacggc
aatggcaacggcgccaatagaaactacccgctttactggtgctaccagtgccacagagcc
gtcagaatttcatccaccaacccatcagaaatcgcctgccctcgatgttcgggccacttt
gtttccgaaattgagatatctcgaccaagactagtcgttgatttcactgcttttgatcct
tcccctgaggcacgtttgctggaagcactctctctcattctcgaccctcccatcaggcga
ttcgatcatggtctttttgatgatcaagaagaacccacgcaagctcgaaggcggtcctgg
tttcgccgcagaaacgttaacatcgaccaagaacctggtattggacgcagcaatgttcac
aggagaccacggagaaatcgtagttttgatggcaacacaaatgaagaaacggatgctctg
cctcgtcctcggacttggattattcttagacatgcggagcctccaaatctgctggaacca
atcttgcgccccggtcaaaatcctttacctcctgctgttaatccgagagactactttctt
ggtcagggaatgcagcaactgattgaagaaataacacagaatgaccggcctggaccacct
ccggtaccggaggctgccatccaggcgataccgacggtagagatcatggaatcacatttg
gccaatgacaacacttgtccggtttgtaaagaggagtttaaggttggaggggaagcgagg
gagttggcttgtaagcatatttatcacagcgaatgcattgttccctggctgaggctgcat
aattcttgccccgtttgtcgacatgaggtgccagttagcagtgcatccagcagccacgat
gttgacagtgatgacgaacatggtgatggtgctcggaggaggtgtttgaggttgcggcag
ctggcctttttatggccatttcggtcaaggtataatcaaagaattaatccggagggcgac
aatattgcttcttcccaagcagaaaactcaggatggcgccattgcggtattctgtag
DBGET
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