Citrus sinensis (Valencia orange): 102622289
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Entry
102622289 CDS
T02983
Name
(RefSeq) uncharacterized protein LOC102622289
KO
K14536
ribosome assembly protein 1 [EC:3.6.5.-]
Organism
cit
Citrus sinensis (Valencia orange)
Pathway
cit03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
cit00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
102622289
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cit03009
]
102622289
Ribosome biogenesis [BR:
cit03009
]
Eukaryotic type
Pre-60S particles
GTPases
102622289
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
EFG_C
EFL1
EFG_III
EF-G_D2
GTP_EFTU_D2
SRPRB
EFG_IV
Baseplate_J
MMR_HSR1
Motif
Other DBs
NCBI-GeneID:
102622289
NCBI-ProteinID:
XP_006484501
LinkDB
All DBs
Position
4:complement(22994192..22997266)
Genome browser
AA seq
1024 aa
AA seq
DB search
MGDSDTRKNRNISILAHVDHGKTTLADHLIAATGGGLLHPKLAGKLRFMDYLDEEQRRAI
TMKSSSIALHYKDYAINLIDSPGHMDFCSEVSTAARLSDGALVLVDAVEGVHIQTHAVLR
QSWIEKLTPCLVLNKIDRLISELKLTPLEAYNRLLRIVHEVNGIMSAYKSEKYLSDVDSL
LSVPSEKLGDENLQFIEDDEEDTFQPQKGNVAFVCGLDGWGFSISEFAEFYATKLGASTA
ALEKALWGPRYFNPKTKMIVGKKGISTGTKARPMFVQFVLEPLWQVYQAALEPDGDKGVL
EKVIKSFNLSIPRRELQNKDPKAVLQAVLSHWLPLSDAILSMVVKCIPDPISAQSYRISR
LLPKREILDNDVDCNVLTEADFVRKSVEVCNSSPEAPCVAFVSKMFAVPIKMLPQRGSNG
EILDNYADKGGNGESEECFLAFARIFSGVLYSGQRVFVLSALYDPLKVESMQKHIQEAEL
QSLYLMMGQGLKPVASAKAGNVVAIRGLGQQILKSATLSSTRNCWPFSSMVFQVSPTLRV
AIEPSDPADMGALMKGLRLLNRADPFVEVSVSSRGENVLAAAGEVHLERCIKDLKERFAK
VSLEVSPPLVSYKETIEGDTSNPLQNVILLSGSSDYFEKTTPNGRCVVRVQVMKLPFTVT
KVLDECADLLGIIIGGQANKSLETQRSSSGEDDNPIEALRKRIMDAVEDHISAGNENDQY
RMEKCKVKWQKLLRRIWALGPRQIGPNILFKPDDKQIDTESSVLVRGSAHVSERLGFVDN
SDDGDAAEEIPPGVNRASFVEAQSLESSIVSGFQLATASGPLCDEPMWGLAFIVEAYISP
VAGKYVDSETSQQSEQHGIFSGQVMTAVKDACRQAVLKKKPRLVEAMYFCELNTPVDSLS
KMYGVVSRRRARVLKEEMLEGSALFTVHAYLPVSESFGFADELRKETSGAASALLALSHW
EELPEDPFFVPETAEEKEEHGDGSSVLHNTARKLMDAVRERKGLPVEKKVVEHGAKQRTL
ARKV
NT seq
3075 nt
NT seq
+upstream
nt +downstream
nt
atgggtgactctgatacacgaaaaaaccgaaacataagcatactggctcatgttgatcac
ggtaagacaacacttgctgatcatctgattgccgccaccggcggcggtttacttcaccct
aaactagctggtaaacttaggtttatggattatcttgatgaggaacaaaggcgtgctatt
acgatgaagagctcttcgattgctcttcattataaagattatgctattaaccttatagac
tcccctggccatatggacttttgtagtgaggtttccaccgctgctcgtttgagtgatggt
gcattggtgttggttgatgctgttgagggtgttcacattcagactcatgccgttttgcgg
caatcttggattgagaagttgactccgtgtttggtacttaataagattgataggttgatt
tctgagttgaagttgactccgttggaagcgtataaccggttgttgaggattgttcatgaa
gtgaatgggattatgagtgcgtataagtcggagaagtatttgtctgatgtagattcttta
ctttcggtgccatcagagaagctaggcgatgagaatcttcagtttatagaggatgatgaa
gaagatacatttcaaccccagaagggtaatgtagcatttgtgtgcggattggatggatgg
ggttttagcataagtgagtttgccgaattttatgctacaaaacttggggcaagcactgct
gcattggagaaggctttgtggggtcctcggtatttcaatccgaagacaaagatgattgtg
gggaagaagggaataagtacagggactaaggctcggcccatgtttgtacagtttgttcta
gagccattatggcaggtttaccaggctgctttagaaccagatggggataaaggggtgctt
gagaaagtgattaaatcatttaatttgtctattccgcgtcgtgaattgcagaacaaggat
ccaaaggctgtgcttcaggctgtcctgagccattggctccctctatctgatgcaatcttg
tcgatggtagtgaaatgtatacctgacccaatttctgctcaatcctatcggatttcccgt
ttgcttcctaaaagagagattttggataatgatgttgattgcaatgtactaacagaggct
gattttgtgagaaagtcagttgaggtttgtaattctagcccagaagctccatgtgttgct
ttcgtttcgaagatgtttgctgtccctatcaaaatgctgcctcaaagaggttcaaatggg
gagattttggacaattatgctgacaaaggtggaaatggtgaatcagaagagtgcttcctt
gcatttgcaagaatctttagtggagttctttattcaggacaaagagtttttgtgctttca
gctttgtatgatccattaaaggtggaatcaatgcagaagcacatacaagaagcagagttg
caatccttatatctaatgatgggtcaaggcttgaaaccagtagcatctgccaaggcagga
aatgttgtggcgatccgaggtctgggtcagcaaatattgaagagtgcaactctttcatct
acaagaaactgttggcctttctcgagtatggtattccaggtttcccccactttaagagtt
gcaattgaaccatctgatccagcagatatgggcgctttgatgaaaggtttgaggcttctg
aatcgagcagatccatttgtggaggtttctgtttcatctcgtggggaaaatgtacttgct
gctgcaggagaggttcatctggaaagatgcataaaggatttgaaggagaggtttgctaag
gtaagtttggaagtctctccgcctcttgtgtcctataaagagaccattgagggcgataca
tctaatccattacagaatgtgatattgttgagtgggagctcagattattttgagaaaaca
actccaaatgggagatgtgttgttcgagtgcaagtcatgaaacttccttttacggtgact
aaggtgcttgatgagtgtgctgatttgcttggaattattattggagggcaagccaataaa
agtttggaaacccagagatcaagcagtggtgaggacgataacccaattgaagctctcaga
aaacgcataatggatgccgtggaggatcatatttctgctgggaatgagaatgaccagtat
cggatggagaaatgtaaagtaaagtggcagaaacttcttaggaggatttgggcgcttggt
ccaaggcagattggtcctaacatcctcttcaaaccagatgataaacaaattgatactgag
tcctctgttcttgtaaggggttctgctcatgtatctgagagattaggctttgtggataac
tctgatgatggtgatgcagctgaggagatacctccaggagttaatcgagcttcatttgtg
gaagcacagtctcttgagagcagcatagtgtctggatttcagctagctacagcatctggt
cctttatgtgatgaaccaatgtggggattggcttttattgttgaggcttacatctctcct
gtggctgggaaatatgttgactctgaaacttcccaacaatctgagcagcatggcatcttc
tctgggcaagttatgacagctgttaaagatgcatgtagacaagctgtgctcaagaagaaa
ccccgacttgttgaagccatgtatttttgtgagttgaacacaccggttgattctttgagt
aaaatgtatggagtggtttcccgaaggcgggctcgggtgctgaaggaggaaatgctggaa
ggttctgcacttttcacggttcatgcttatttgcctgtttctgaaagttttggttttgct
gatgagcttaggaaagaaacttctggtgctgcaagtgctcttcttgcccttagccactgg
gaagaacttcctgaggatcctttctttgtacccgaaacagcggaggagaaggaagagcat
ggagatggttctagtgttcttcacaatacagcaagaaaactcatggatgctgtgagggaa
cggaaaggcttacctgtcgaaaaaaaggtagtggagcatggagctaaacagaggacctta
gctcgcaaagtttga
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