Citrus sinensis (Valencia orange): 102622327
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Entry
102622327 CDS
T02983
Name
(RefSeq) pectate lyase-like
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
cit
Citrus sinensis (Valencia orange)
Pathway
cit00040
Pentose and glucuronate interconversions
cit01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cit00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
102622327
Enzymes [BR:
cit01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
102622327
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Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
102622327
NCBI-ProteinID:
XP_006469935
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All DBs
Position
2:complement(join(11636035..11636256,11636533..11636671,11636767..11637507,11637601..11637710))
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AA seq
403 aa
AA seq
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MSNISVFLIFFFSLLIPNLVSSSSIQDPELVAQDVHRSINASRRNLAYLSCGTGNPIDDC
WRCDPNWERNRQRLADCAIGFGRDAIGGRNGRIYVVTDSGDDNPTNPKPGTLRHAVIQDE
PLWIIFNRDMVIKLNQELVMNSHKTIDGRGASVHIADGPCITIHFATNIIIHGIHIHDCK
KAGNGNIRDSPEHSGWWDASDGDGVSIFSSQHIWIDHCSLSNCQDGLIDAIHGSTAITIS
NNYFTHHDKVMLLGHSDSYTQDKNMQATIAFNHFGEGLVQRMPRCRQGYFHVVNNDYTEW
QMYAIGGSAAPTINSQGNRFFAPNERFRKEVTKHEDAPESEWRNWNWRSEGDLMLNGAYF
RQTGAGASSTYARASSLNARPSTLVGPMTMRAGALNCRKGSRC
NT seq
1212 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaatatttcagtctttcttatcttcttcttctctcttttgattcctaatttggtt
tcatcttcatcaattcaagaccccgaactcgttgcacaagatgtgcacaggagcatcaat
gcttctcggcggaacttggcctatttgtcttgtggaactggaaaccctattgatgattgc
tggagatgtgacccaaattgggagagaaatcgccaaagattagctgattgtgccattgga
tttggcagggatgccattggaggaagaaatggtcgaatttatgtggtcactgactccggc
gacgataacccgacaaacccgaaaccggggactctcaggcatgcggtgattcaagatgag
ccattgtggattatattcaatagagacatggtgattaagctgaaccaagagctggttatg
aactctcacaagacaattgatggtagaggtgcaagtgttcacattgccgatgggccatgc
attaccatacattttgctactaacatcattatccatggcattcacatacatgattgtaag
aaagctggcaatgggaatataagagattcacctgagcattctggatggtgggatgcgtcg
gatggtgatggggtttccatattttcaagtcagcatatatggattgatcattgctcattg
tctaattgccaagatggactcattgatgccatccatggatccactgccatcaccatttct
aacaactacttcactcatcatgataaggtcatgctcttgggccacagtgattcttatact
caagacaagaacatgcaagccactattgcctttaatcattttggagaagggctagtacaa
agaatgccgagatgcaggcaagggtattttcatgtggtcaacaatgactatactgaatgg
caaatgtatgctattggtggaagtgctgcccctactattaacagccaaggcaatagattt
tttgcacccaatgaaagatttaggaaagaggtgactaaacatgaggatgcaccagagagt
gaatggaggaactggaattggagatcagaaggggacttgatgttgaatggggcctatttc
cggcaaacgggagccggtgcatcttcaacctatgctagagcttccagtctgaatgcaaga
ccatctactcttgtgggtccaatgaccatgagagctggcgcactcaactgcagaaagggc
tctcgttgctga
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