KEGG   Citrus sinensis (Valencia orange): 102622568
Entry
102622568         CDS       T02983                                 
Name
(RefSeq) polynucleotide 3'-phosphatase ZDP isoform X2
  KO
K08073  bifunctional polynucleotide phosphatase/kinase [EC:3.1.3.32 2.7.1.78]
Organism
cit  Citrus sinensis (Valencia orange)
Pathway
cit03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:cit00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    102622568
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:cit01009]
    102622568
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:cit03400]
    102622568
Enzymes [BR:cit01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.1  Phosphotransferases with an alcohol group as acceptor
    2.7.1.78  polynucleotide 5'-hydroxyl-kinase
     102622568
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.3  Phosphoric-monoester hydrolases
    3.1.3.32  polynucleotide 3'-phosphatase
     102622568
Protein phosphatases and associated proteins [BR:cit01009]
 HAD phosphatases
  Other HAD phosphatases
   102622568
DNA repair and recombination proteins [BR:cit03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Other BER factors
     102622568
SSDB
Motif
Pfam: PNK3P zf-PARP Hydrolase_6 Nanovirus_C8
Other DBs
NCBI-GeneID: 102622568
NCBI-ProteinID: XP_006477746
LinkDB
Position
3:complement(join(11715120..11715167,11716172..11716241,11716483..11716604,11717483..11717599,11717750..11717831,11718257..11718333,11718781..11718837,11719005..11719076,11719240..11719305,11719389..11719427,11719591..11719650,11720124..11720501))
AA seq 395 aa
MLNLSTFRATLGNAIVPQQLIPRFHGRCQRAQKHLHSICFQIKQAPSSAPPPPQMPPKVV
AEYAKSNRSSCKKCSKTIAANALRLGSVTRDSRGFDMTKWHHVDCFPIVSEPIDSADSIQ
GFSSLQSADQEALKTLVTKCQTSLEEAFDGSEGNSKGLVVQKTDEDEEEVELESTNSKKR
KLSAPGEEAHLEIAFSVSDVKDKYKNATLLPNWKAFQTVIFLERADGLHDSKKIAAFDFD
GCLVKTNVKRVGADAWSLMYPSVPDKLQSLYNDGYKLVIFTNEANIERWKNKRQIAVDSK
LGRLNNFIKCVKVPIQVFVACGIASGKAEDPFRKPKPGMWQIMEKYFNSGISIDMDQSFY
VGDAAGRKNDHSDADIQFAKAVGLKFYVPEEYFGS
NT seq 1188 nt   +upstreamnt  +downstreamnt
atgctaaacctctctactttccgtgcaaccctcggtaacgctatcgttccccaacagtta
atccctcgtttccacggccggtgccagagagcacaaaaacacttgcacagtatctgcttc
caaataaaacaagcgccgtcgtctgcgccgccgccgccgcaaatgccacccaaagtcgtc
gccgagtacgcgaaatcgaataggtcgtcatgcaaaaagtgctccaagactattgcggcc
aatgctttgagattaggttccgtcaccagagactcgcgtgggtttgacatgacgaaatgg
caccacgtggattgctttccgattgtttccgagcccattgattccgctgattccatccaa
ggattttcttcgcttcagagtgctgatcaagaagctctgaagacattggttaccaaatgc
cagacctctctggaggaggcttttgatggaagtgaaggaaattcgaaggggttggtggtt
cagaaaacagacgaagatgaagaagaggttgaactggagagtacaaattcaaagaaaaga
aagttatcagcccctggtgaggaagctcatctagagatagcattttcagtctctgacgtc
aaggacaagtataagaatgctacgctgttaccaaattggaaggcattccaaacagtcata
tttcttgagcgggctgatggtctacatgattcaaagaaaattgctgcatttgattttgat
ggatgtcttgtgaaaacaaatgtgaaaagagtaggcgcagatgcttggtcccttatgtat
ccttcagtaccagacaagctgcagagcttgtataatgatggctacaagctagtaattttc
accaacgaagccaacattgaacgctggaagaacaaaagacagatagctgtggactcaaaa
ctgggacgtctcaacaatttcatcaagtgtgtgaaggtccccatacaggtttttgttgca
tgcgggatagcaagtggtaaagctgaagatcccttccgcaagcccaaacctgggatgtgg
caaattatggagaaatatttcaactctggcatttctatcgatatggatcaatcattttat
gttggtgatgctgctgggagaaaaaatgatcatagtgatgctgatattcagtttgcaaag
gcggttgggttgaaattttatgtccctgaggaatactttggctcttga

DBGET integrated database retrieval system