Citrus sinensis (Valencia orange): 102622839
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Entry
102622839 CDS
T02983
Name
(RefSeq) DNA damage-binding protein cmr1
KO
K24755
WD repeat-containing protein 76
Organism
cit
Citrus sinensis (Valencia orange)
Brite
KEGG Orthology (KO) [BR:
cit00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cit04121
]
102622839
03036 Chromosome and associated proteins [BR:
cit03036
]
102622839
03400 DNA repair and recombination proteins [BR:
cit03400
]
102622839
Ubiquitin system [BR:
cit04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
102622839
Chromosome and associated proteins [BR:
cit03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
102622839
DNA repair and recombination proteins [BR:
cit03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Other MMR factors
102622839
DSBR (double strand breaks repair)
Other DSBR factors
Others
102622839
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40_Prp19
WDR55
WD40
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_EIPR1
Beta-prop_TEP1_2nd
Beta-prop_RIG_2nd
EIF3I
Beta-prop_EML
WD40_RFWD3
Beta-prop_HPS5
Beta-prop_CAF1B_HIR1
Beta-prop_WDR75_2nd
Beta-prop_IP5PC_F
NBCH_WD40
Beta-prop_Vps41
Beta-prop_WDR19_1st
Motif
Other DBs
NCBI-GeneID:
102622839
NCBI-ProteinID:
XP_006473963
LinkDB
All DBs
Position
9:join(33741424..33741554,33741909..33742668,33742828..33743234,33743643..33743741,33743861..33744074)
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AA seq
536 aa
AA seq
DB search
MAPEKLTEYERKRLENIKRNEEMLAALKVHAKASDLSAASKRQRVEIKAYKVSPQKKYKP
ETPIVLRRSLRTQGMQPDSKGLSDHSVASDPKTSKSVSPKKSSAMTGPLSFKNAYVETGT
FVSLVDAFLSVAKKPHFGEIKEEFNASLDYEMKPKVGVIVPVKEDEVRACKDENLGFVIK
DEFNGFKTCKDEGLSVGSCDLIKGVVKTEKIEVGSCVDIGSLTLKPENIARIMPGRITQM
KFLPCSDVRMVVAGSKLGNITFWNLDSQQDEDNGIYLFRTHLGPISGIVTQQYCLSKIFT
SCYDGLIRLMDAEKEVFDLVYSSEYAVFSLSQQPNNVNTLYFGEGQGGLNIWDVRSRKSA
TEWLLHEARINTIDFNPRNPNIMATSSTDGTACIWDLRSMATDKPEPTKVLSHKRAVHSA
YFSPSGSSLATTSFDDTIGIWSGVNFENTAMIHHNNQTGRWISSFRAIWGWDDSCIFIGN
MTRTVEVISPAQRRSVATLQSPYISAIPCRFHAHPHQVGTLAGATGGGQVYVWTSD
NT seq
1611 nt
NT seq
+upstream
nt +downstream
nt
atggcgcctgaaaaactaacagagtatgagcgaaaacgacttgaaaacattaagcgaaac
gaggagatgctggcggctctcaaagtacacgctaaggcctccgatctctcagccgcttca
aaacgccaaagggttgagattaaggcatataaagtgagtccacagaagaaatataaaccc
gagaccccgattgtgctcaggcgttctttaagaacccaaggaatgcagccggattcgaag
ggtttgagtgatcattcggttgcttctgatcctaaaacctcgaaatctgttagtccaaag
aagtcctctgctatgacaggtcctctgagctttaaaaacgcttatgttgaaactgggact
tttgtatcacttgttgatgcctttttgagtgttgcaaagaaaccccattttggtgaaatt
aaagaagaattcaatgcaagtttggattatgagatgaaacctaaagtgggggttatagtt
ccagttaaagaagatgaagttagggcttgtaaggacgagaacttgggttttgtaattaag
gacgaatttaatggatttaaaacttgcaaagatgagggtttgagtgtgggttcttgtgat
ttaattaagggtgtggttaaaacagagaagattgaagttgggagttgtgttgatatagga
tcattaactctgaagccagagaatatagcgcgaattatgccaggaagaataacgcagatg
aagtttcttccttgtagtgatgtgagaatggttgtggctggaagcaagctgggaaatatt
acattttggaatttggattctcagcaagatgaagacaatgggatatatttgtttcgcacg
catttaggtcctatatcagggattgtaactcaacaatattgcttgtctaagatcttcacc
agttgctatgatggtttaattcgattaatggatgctgagaaggaggtattcgatctagtt
tactccagcgagtatgctgtattttcactttcgcaacagccaaacaatgtgaacacttta
tatttcggtgaaggtcaagggggattgaatatctgggatgtgagaagtagaaaatccgca
actgaatggcttctgcacgaagccaggatcaacaccattgattttaatccacgaaacccc
aatatcatggctactagttccacggatgggactgcttgtatttgggatttgagaagtatg
gcaacagataaaccagaacctacgaaggtgttgagtcataagagggcagtgcattctgct
tacttctcaccctctgggagctcccttgcaacgacaagttttgatgatactatcggtata
tggagtggggtcaactttgaaaatactgcgatgatacaccacaataatcaaactggaagg
tggatatcgtctttcagagcaatatggggttgggatgattcatgcattttcattggcaac
atgacaagaacagttgaagtcatctctcctgctcaaagaagaagtgtagcaactttgcag
agcccatatatctctgcaattccttgcagatttcatgctcaccctcatcaggttgggacg
ctagcaggagctacaggtggtggccaggtttatgtttggacatcagattaa
DBGET
integrated database retrieval system
