KEGG   Citrus sinensis (Valencia orange): 102622899
Entry
102622899         CDS       T02983                                 
Name
(RefSeq) coatomer subunit beta'-2-like
  KO
K17302  coatomer subunit beta'
Organism
cit  Citrus sinensis (Valencia orange)
Brite
KEGG Orthology (KO) [BR:cit00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:cit04131]
    102622899
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:cit04147]
    102622899
Membrane trafficking [BR:cit04131]
 Endoplasmic reticulum (ER) - Golgi transport
  Retrieval pathways
   Coat protein complex I (COP-I)
    102622899
Exosome [BR:cit04147]
 Exosomal proteins
  Exosomal proteins of colorectal cancer cells
   102622899
SSDB
Motif
Pfam: B-prop_COPA_B_2nd TPR_COPA_B WD40 WD40_Prp19 WD40_WDHD1_1st Beta-prop_EML_2 WDR55 WD40_CDC20-Fz Beta-prop_WDR75_1st WD40_MABP1-WDR62_2nd Beta-prop_EML Beta-prop_WDR90_POC16_2nd EIF3I Beta-prop_TEP1_2nd Beta-prop_EIPR1 Beta-prop_CAF1B_HIR1 WD40_MABP1-WDR62_1st Beta-prop_TEP1_C Beta-prop_SCAP Beta-prop_RIG_2nd Beta-prop_IFT140_1st ANAPC4_WD40 Beta-prop_HPS5 NBCH_WD40 WDR90_beta-prop_4th Beta-prop_WDR19_1st PEP5_VPS11_N Beta-prop_WDR35_TULP_N Beta-prop_SPT8 Beta-prop_DCAF4 Beta-prop_IFT122_1st WD40_RFWD3 Beta-prop_Nup120_160 WD40_like Clathrin WD_LRWD1 Beta-prop_WDR75_2nd TPR_CcmH_CycH Beta-prop_DCAF12 HEAT_GCN1
Other DBs
NCBI-GeneID: 102622899
NCBI-ProteinID: XP_006465563
LinkDB
Position
7:join(9746988..9746990,9747643..9747663,9747789..9747850,9747992..9748046,9748348..9748384,9748532..9748857,9748948..9749079,9749174..9749322,9749523..9749591,9749938..9750088,9750171..9750236,9751045..9751233,9751568..9751708,9751812..9751886,9752019..9752195,9752301..9752392,9752483..9752599,9753183..9753297,9753446..9753517,9753675..9753871,9753957..9754050,9754686..9754792,9755076..9755205,9755426..9755564,9756284..9756312)
AA seq 914 aa
MPLRLEIKRKLAQRSERVKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPV
RSAKFVARKQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDD
MLIKLWDWEKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFT
LDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPE
LPIIITGSEDGTVRIWHATTYRLENTLNYGLERVWAIGYMKSSRRIVIGYDEGTIMVKIG
REEPVASMDNSGKIIWAKHNEIQTVNIKSVGADYEVTDGERLPLAVKELGTCDLYPQSLK
HNPNGRFVVVCGDGEYIIYTALAWRNRSFGSALEFVWSSDGEYAVRESSSKIKIFSKNFQ
EKRSVRPTFSAERIYGGTLLAMCSNDFICFYDWAECRLIRRIDVTVKNLYWADSGDLVAI
ASDTSFYILKYNRDVVSAYLDSGKPVDEQGVEDAFELLHETNERVRTGLWVGDCFIYNNS
SWRLNYCVGGEVTTMFHLDRPMYLLGYLASQSRVYLIDKEFNVMGYTLLLSLIEYKTLVM
RGDLERANEILPSIPKEHHNSVARFLESRGMIEEAIEVATDPDYRFELAIQLGRLEVAQE
IATEVQSESKWKQLGELAMSTGKLEMAEGCMKQAMDLSGLLLLYSSLGDAEGISKLASLA
KEQGKNNVAFLCLFMLGKLEDCLQLLVESNRIPEAALMARSYLPSKVSEIVAIWRKDLQK
VNPKAAESLADPEEYSNLFDDWQVALAVESKAAATRGVHPPAEDYVNHADKSYMTLVEAF
RHMQIEEEDTLENGDLDHEGSEQNGEENAEEQNGEEGSQEEPVVVDADSTDGAVLVNGNE
AEEQWVLTPRHQDS
NT seq 2745 nt   +upstreamnt  +downstreamnt
atgcctctcagactcgaaatcaagagaaaacttgctcaaagatcagagagagtaaagtct
gtggatttgcatccatctgaaccatggattctagcaagtttgtattcaggaactgtgtgt
atctggaactaccagtcacagactatggctaagtcttttgaggtcactgagttaccagtt
agatcagctaaatttgtggcccgcaagcaatgggtagttgcaggagctgatgacatgttt
attcgtgtatacaattacaatacaatggacaaagttaaagtatttgaggctcatacggat
tacattagatgtgtggctgttcatcctacccttccgtatgtgctgtcatcatctgatgat
atgctcataaagctttgggattgggagaagggttggatgtgtactcagatatttgaggga
cattctcattatgttatgcaagtgacatttaatccaaaagacaccaatacctttgctagt
gcatcacttgatcgaaccattaagatttggaaccttggttctcctgacccaaatttcaca
cttgatgcccatcagaaaggagtaaactgtgttgattacttcactggtggtgataaacct
tatctgatcactggctcagatgatcacactgctaaggtatgggactatcagaccaaaagt
tgtgtccagacacttgaaggccatactcacaatgtgtctgcagtatgtttccaccctgag
cttcctattattatcacgggttctgaggatgggacagttcgtatttggcatgcaaccact
tacaggcttgagaacacattgaattatggtcttgaaagagtttgggctattgggtatatg
aaaagttcacgcaggattgtgatcggttatgatgagggaactatcatggtgaaaatcggt
cgtgaagaacctgttgctagtatggataatagtggaaagatcatatgggctaagcacaat
gagattcaaactgtgaacatcaagagtgtgggagcagattatgaggttactgacggagaa
agattgccattggctgttaaggagttgggaacctgtgatctttacccacaaagcttaaag
cacaatcccaatgggaggtttgttgtcgtctgtggagatggtgaatacattatatataca
gctttggcatggagaaataggtcctttggttctgcactggagtttgtttggtcatctgat
ggagaatatgctgttagagaaagttcatcaaagataaaaattttcagtaaaaattttcag
gaaaaaaggagtgtccgaccaaccttctccgccgagcgtatttatggaggaactttattg
gcaatgtgctcaaatgattttatttgcttctatgattgggctgaatgcaggctaattagg
cgaattgatgtcactgtgaaaaatctttattgggctgacagtggtgatctagtggcaatt
gcaagtgatacatcattctacattctcaagtacaatcgcgatgtcgtttcagcttattta
gatagtggaaagccagtggatgaacaaggtgttgaagatgcttttgagctccttcatgaa
accaatgagcgtgtcaggactggtttatgggttggggattgtttcatttacaacaattcc
tcctggagacttaattactgtgttggcggtgaggtaaccacaatgtttcatttggaccgg
cctatgtacttgttggggtaccttgctagtcaaagccgtgtgtatctgattgacaaagag
ttcaatgttatgggatacacattacttctcagcttgattgagtacaagactcttgtcatg
cgtggagatttggagagggccaatgaaatcttaccttcaattccaaaagagcatcacaat
agtgtggctcgtttcctggagtcacgaggtatgatagaggaagctatagaagtggctact
gaccccgattatagattcgaactagccatacagctgggcagattggaggttgcacaggaa
atagctacagaagtgcagagtgagtctaaatggaagcaattgggagaattagctatgtcc
actggaaagttggaaatggctgagggatgcatgaaacaagcaatggatttgagtggtttg
ttgctgctctattcttctttaggagacgccgaagggatatccaaacttgcttctctagct
aaagagcaaggaaagaacaatgttgcattcctttgtttatttatgttgggtaaattggaa
gactgcctccagctgttagtggaaagtaatcggatacctgaggctgctttgatggcaaga
tcataccttccaagcaaggtttcagagattgttgctatttggagaaaagacctccaaaag
gtgaacccaaaagctgctgaatctctggctgatcctgaagagtattctaatctatttgat
gattggcaagttgctcttgctgttgagtccaaagctgctgctaccaggggtgtacatcct
cctgcagaggactatgtaaaccatgcagataaatcatacatgacgcttgtggaggctttc
agacacatgcaaattgaagaagaggacactcttgaaaatggagatcttgatcatgagggt
tccgaacaaaatggagaagagaatgcagaggaacagaatggagaagaaggaagccaagag
gagcctgtcgtagtggatgctgattcaacagacggtgcagtactcgttaacggtaacgag
gctgaagaacagtgggtgcttacaccacgtcatcaggattcatga

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