Citrus sinensis (Valencia orange): 102623089
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Entry
102623089 CDS
T02983
Name
(RefSeq) plant-specific TFIIB-related protein PTF2
KO
K15196
transcription factor IIIB 90 kDa subunit
Organism
cit
Citrus sinensis (Valencia orange)
Brite
KEGG Orthology (KO) [BR:
cit00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cit03021
]
102623089
Transcription machinery [BR:
cit03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIB
102623089
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRF2-like_C_cyclin_rpt
TFIIB
Zn_Ribbon_TF
Zn_ribbon_RRN7
AKAP28
Motif
Other DBs
NCBI-GeneID:
102623089
NCBI-ProteinID:
XP_006485079
LinkDB
All DBs
Position
4:complement(17754579..17756171)
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AA seq
530 aa
AA seq
DB search
MPCTSCGSKTLTREDISGSLICVSCGVVQAFDNYDAQLYGRDGPTGIYVHVGTAGTGSAL
NYKEKKIYESNKLIDELTFKLDLTGQRSIQIKNMIDKITDGEFGLGDWFPILIGACSYVV
MRLDDKSLPISEVASVLNCDVYELGRMITRVVEFLNLKLPEVDIVSMFERVIRNSRLQGF
TNLDESMLDRMRKQGVLLLNCAVKWFLTTGRRPMPVVVAVLVFVVELNGVSVKIENVAKE
VHCTVVTCRKRYKELLEALVKVAQALPWGKDVTVKNVLKNSPFVMNYMEMKSMEKRKEER
DGLNCGGIDLGDVVSECLKKDVEYRIEGGGVESDPRYLEVEERSGLALTGVDCVHKTQLS
HECLAMIYTRFANEIDDGKLLEESEVIHGVKGRGGYELHAYRDWWCGKSELSKKVLLKKI
LEKDVGLDVMPPSFVNGCMVNERRRAKINAAKIRIDKIMNPSRASTGDVDNVYFLESVHT
RKRKRKPVAEIDWEDLIIETLLLHQVKEEEIEAGHYNTLLDLHVFNSGIM
NT seq
1593 nt
NT seq
+upstream
nt +downstream
nt
atgccatgcacaagttgcgggtcaaagaccctcacccgcgaagacatctccggcagccta
atatgcgtgtcatgcggcgtcgttcaagcattcgacaactacgacgcccaattatacggc
cgcgacgggccgactggaatctacgtccacgtcggcactgcaggtacgggttctgccttg
aactataaagaaaaaaaaatctacgaatctaataaattaatcgatgagttaacctttaag
ctagatttgaccggtcaaagatctattcaaataaaaaacatgatcgataaaatcaccgac
ggcgagttcgggttaggagattggttccctattttaatcggcgcgtgtagttatgttgta
atgagactggatgataaatcgctaccaatttccgaagtagcatcggttctcaactgtgat
gtgtacgaattaggtagaatgattacacgtgttgttgagtttttgaatttaaaattacct
gaagttgacattgtgagtatgttcgagagagtcattaggaactccaggttgcaagggttt
accaatttggatgagagtatgttggacaggatgagaaagcaaggagtgcttttgttgaat
tgtgcggtgaaatggtttttgactactggaaggaggccaatgccagtggtggtggcagtg
ttggtgtttgtggtggagttgaatggggtcagtgtgaagattgagaatgttgcgaaggag
gtacattgcacagtggttacatgtaggaagcgatataaggagttgttggaagcgcttgtg
aaagtggcacaggcattgccttgggggaaggatgtgactgtcaagaatgttctgaagaat
tctccgtttgtgatgaattatatggagatgaagtcgatggagaagaggaaagaagagagg
gatgggttgaactgtggcggcattgatttgggtgatgtggttagtgagtgtttaaagaaa
gacgttgagtacagaattgaagggggtggggtggaaagtgatcctcggtatttggaggtg
gaagaaagaagcgggctcgcattaacaggggttgattgtgttcataagactcaactttct
catgaatgcttggcgatgatttatactaggtttgcaaatgagattgatgatggtaagctg
ttggaagagagtgaggtgatacatggagtgaagggaaggggagggtatgagcttcatgca
tatagggattggtggtgtggaaaatcagaattgagcaagaaggttttgctgaagaaaata
ctggagaaagacgttgggttggatgttatgcctccatcttttgttaatggttgcatggtg
aatgagaggaggagagcaaagataaatgctgctaagatacggattgataagattatgaat
ccctcgagggctagtactggtgatgttgacaatgtttactttttggaaagtgtacatacc
aggaagagaaaacgaaagccagttgctgaaattgattgggaagatttaatcattgagacc
cttctcctccatcaggtgaaggaagaggaaattgaggcagggcactataatacattgttg
gacttgcatgtgttcaactcagggattatgtaa
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