KEGG   Citrus sinensis (Valencia orange): 102623116
Entry
102623116         CDS       T02983                                 
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 23 isoform X1
  KO
K15166  mediator of RNA polymerase II transcription subunit 23
Organism
cit  Citrus sinensis (Valencia orange)
Brite
KEGG Orthology (KO) [BR:cit00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:cit03021]
    102623116
Transcription machinery [BR:cit03021]
 Eukaryotic type
  RNA polymerase II system
   Mediator complex
    Other mediators
     102623116
SSDB
Motif
Pfam: Med23
Other DBs
NCBI-GeneID: 102623116
NCBI-ProteinID: XP_006469228
LinkDB
Position
2:complement(join(24125882..24126083,24126177..24126280,24127263..24127444,24128271..24129036,24129163..24129403,24129833..24129981,24130417..24130542,24130632..24130745,24130911..24131081,24131185..24131430,24131524..24131686,24131966..24132060,24133151..24133234,24133601..24133881,24136212..24136419,24136559..24136776,24137617..24137851,24138564..24139544,24139672..24139840,24140085..24140128,24140226..24140351))
AA seq 1634 aa
MDQNQSQRSSIGAATASSASSRAYQFHPARAAIIDLFNLYLGRSSRQKQDDSIRDPPLLI
RGFVACCGGILLIVEEFMLRNKTQKRVLALNRELPPRNEQFLIDFEQLQSQFPDQDQLRS
VTESVLISLVVQCCSHVPRAEFILFALRSLCSIGYINWDTFLPSLLSSVSSAEMSAGQGS
QAMPAVSATSLQQSGMLPTSSGIPNSSNYQSSNPASPLPSVHGIGSPAQSAIETSVCAAM
SPVKSSDVSCTGQQFTTRVNSSVRDNAISSLRQLCCKIILTGLEFSLKPVTHADIFYHML
NWLVTWDQKQQGIDESDGKSWRLDKALIEWLHSCLDVIWLLVDEDRCRVPFYELLRTGLQ
FIENIPDDEALFTLILEIHRRRDMMAMHMQMLDQHLHCPTFGTHRILSQTTPNISVEAAG
NLRYSPITYPSVLGEPLHGEDLATSIQRGSLDWERAMRCIRHAIRATPSPDWWKRVLLVA
PCYRNPAQGPTPGAVFTYDMISEAVIDRIVELLKLTNSEVNCWHDWLIFSDVFFFLVKSG
CIDFVDFVDKLVSRLQDGDNHILRTNHVTWLLAQIIRVELVMGALNSDSRKVETTRKILS
FHREDRCTDPNNPQSILLDFISSCQNLRIWSLNTSTREYLNNEQLQKGKQIDEWWRQVSK
GDRMMDYMNMDDRSVGMFWVVSYTMAQPACETVMNWLSSAGVTELFPGSNLPPNERLMVM
REVNPLPMSLLTGFSLNLCLKLALQMEDSIFGGQVVASIAMVETYTRLMLLAPHSLFRSL
FSHLAQRNPTLLAKVGVTPLVLEIVNYRLLPLYRYQGKTKTLMYDITKIISALKVKRGDH
RVLRLAENLCMNLILSQRDFFSLKREGKGSTEFTETLNRITVIALAIIIKTRGIADADHV
LYLQTMLEQIMATSQHTWSEKTLRYFPSLLRDALIGRIDKRGLTIQAWQQAETTVINQCT
QLLSPSADPTYVKTYLSHSFPQHRQYLCAGAWILMQGHPENINSANLLRVLREFSPEEVT
SNIYTMVDVLLHHIHVELQRGHSLQDLLFKACANISFFVLTHELLPLDILLLALIDRDDD
PHALRIVITLLDRQELQQRVKLYCMNRGPPEHWLYSGLFKRVELQKALGNHLSWKERYPT
FFDDIAARLLPVIPLIVYRLIENDAMDSADRVLATYSSFLAYYPLRFSFVRDILAYFYGH
LPGKLIVRILNVFDLSKIPFSESFPQHISSSNPVMCPPLDYFATLLLGLVNNVIPALNYN
SKSGSTMDASLRAPHNKSPITSQSGPSNVSEGRKEFYQNQDPGTYTQLVLETAVIEILSL
PVSASQIVSSLVQIVVNIQPTLIQTSNGPYGASNSVGQGSVLPTSPSGGSTDSLGASRST
PSVSGINTSSFVSRSGYTCQQLSCLLIQACGLLLAQLPPDFHMQLYMEASRIIKESWWLA
DGKRSLGELDSAVGYALLDPTWAAQDNTSTAIGNIVALLHSFFSNLPQEWLEGTHVIIKH
LRPITSVAMLRIVFRIMGPLLPRLVNAHTLFNKTLALLLNTMGDVYGKNTLPPAPVEASE
IADLIDFLHHVVHYEGQGGPVQASSKPRPEVLVLIGRAAESLHPEVQHLLSHLKPDVNSS
IYAATHPKMVQNPS
NT seq 4905 nt   +upstreamnt  +downstreamnt
atggatcaaaaccagagccagagatcatcaattggagcagcaacagcatcatcagcttca
tctcgggcctaccaattccacccggcccgagctgcgatcatcgatctcttcaacctctac
ttaggaagaagtagccgccaaaagcaggacgattccatcagagaccctccgttgttgatt
cgaggctttgttgcttgctgtggtggaattttattaattgtggaagaattcatgctcagg
aacaagacccagaagcgcgtgcttgctcttaacagagagcttcctcctcgaaacgagcaa
tttcttatagattttgagcaattacagagccagtttcctgaccaagatcaattgcgttct
gttactgaatctgttcttatttccttggttgtgcaatgctgtagtcatgtgccgcgagca
gaatttattctgtttgccttacggagcttgtgctctatcgggtacattaactgggatact
tttttgccttcccttctttcctctgtttcctctgcagaaatgtcagcgggtcagggcagt
caagcaatgcctgcagtttcagccacaagtttacagcagtctggtatgttgccaacttca
agcggaattccaaattcttctaactatcaatcctccaatcctgcatctccactgccttca
gttcatggtattgggtctcctgctcaatcagctatagaaacttcagtttgtgcagctatg
tcacctgtaaaatcatctgatgtgtcttgtactggacaacagttcacgacaagggtgaat
tcatctgtaagagataatgctataagcagtctgcggcaactatgttgcaagattattcta
actggtcttgaatttagcttgaaaccagttactcatgctgatattttctatcatatgctg
aattggctggttacttgggatcaaaaacagcaggggattgatgaatctgatggaaaatcc
tggagacttgacaaggctctgattgaatggctgcacagttgtttggacgtaatttggctg
ctggttgatgaggatagatgccgagttcccttttatgaactactgcgtactggcttgcag
tttatagagaacataccagatgatgaagccttatttacactgatcttggagattcatagg
aggcgagatatgatggctatgcatatgcaaatgttagatcagcatcttcattgccccaca
tttgggacacatcggattctgtctcagactactcctaatatttcagttgaagcagctgga
aacttgcggtattcaccaataacatatccaagtgtgcttggagaaccattgcatggagag
gatcttgcaacttctattcaaaggggaagtttggactgggagagagctatgcgttgtata
aggcatgctattcgggcaactccatcacctgactggtggaagcgcgtgcttcttgtagca
ccttgctatagaaatcctgctcaagggcctacccctggtgccgtattcacttatgacatg
attagtgaggcagtaatcgatagaattgttgaactattaaagttgaccaattcagaagta
aattgctggcacgattggcttatcttctcagatgtattcttttttcttgtcaaaagcgga
tgcattgattttgttgattttgtggataagctagtttcccgtcttcaagatggcgacaac
cacatacttcgaacaaatcatgttacttggttacttgcacagattattcgggttgagctt
gtgatgggtgctttgaattctgattctagaaaggtggagacgactagaaagattttatct
tttcaccgagaagatagatgcactgatcctaataaccctcaaagtatcttacttgatttt
ataagtagttgtcaaaacctacgtatttggtcattaaacacatcaactcgagaatatttg
aacaatgagcagcttcagaaaggaaagcaaatagatgaatggtggaggcaagtgagtaag
ggggatcgtatgatggattacatgaatatggatgatagatcggttggaatgttttgggtt
gtttcctacacaatggcacaaccagcttgtgaaacagttatgaattggttatcctcagct
ggagttacagaattgtttccaggatcaaatctaccgccgaacgaaaggttaatggtgatg
agggaagttaacccattgccaatgtcgctattaactggcttttcattaaatctgtgtttg
aagttggctctccaaatggaagattctatatttggtgggcaggttgtggctagcattgca
atggttgaaacttatacgagattgatgttacttgcacctcactctttgtttcggtcactc
ttcagtcatttggcacaaaggaatccgacattgttggcgaaggtaggggtaactccattg
gtgcttgaaattgtcaactaccgattgcttccgctctacaggtatcaaggaaaaaccaaa
acgttgatgtatgatattaccaaaataatttctgccttaaaagtgaaacgcggagatcat
cgtgtacttagattggctgaaaatttgtgtatgaacctaatcttatcacagagagatttt
ttctcattgaaaagggaaggaaagggttcaactgaatttacagaaactctgaatagaata
actgttattgctcttgccatcatcataaaaacacgtgggattgctgatgctgatcacgta
ctttatcttcaaactatgttggaacaaatcatggcaacgagtcagcatacatggtcagaa
aaaacactccggtatttcccatcccttttacgcgatgccttgattgggcggatagataaa
agaggcttgacaattcaagcatggcaacaggcagaaacaactgtgatcaaccaatgcacc
cagcttctttcaccatccgctgatcctacatatgttaagacatatctcagtcatagtttc
cctcaacaccgacaatatttatgtgccggtgcatggatactgatgcaggggcatcctgaa
aacattaacagtgctaacttgttacgtgtattgagagaattttccccagaagaagtaacc
tccaatatctacaccatggtggatgttttacttcatcatattcatgtggaacttcagcgt
ggacattcattacaggacctgctatttaaagcttgtgcaaacatttctttttttgtcttg
acccatgagttgcttcctctggatattttacttcttgcacttatcgaccgtgacgatgat
ccccatgcattgcgtattgtgattactttactcgacaggcaagaacttcaacaaagagtt
aaattatattgtatgaatcgtggtcctcctgagcattggctttactctggattgttcaag
cgtgtggaattgcagaaggcccttgggaatcatctctcatggaaggagaggtatcctaca
ttctttgatgatattgctgcacgtttgcttccggtcatcccgttaattgtctatagactc
attgaaaatgatgccatggattcagctgatagagttctggctacatattcttcttttctg
gcctactacccactacgattctcatttgtccgtgatatacttgcatatttctatggtcat
ctacctggaaagctcattgtcagaatactgaatgtgtttgatcttagcaagattccattt
tctgaatcgtttccacagcatattagttcatcaaatcctgttatgtgcccacctctggac
tactttgcaactctcctattgggtcttgtgaataatgttatacctgcattaaattacaac
tcaaaatcagggtcaacgatggatgcttcattgcgtgctcctcataacaaatctccaata
acatctcagtctggaccttcaaatgtttcagaaggtcgaaaagaattctatcaaaatcag
gaccctgggacatatactcagttagttttggaaacagcagtgattgagatactttcactt
cctgtatctgcatcccagatcgtatcatctttagttcaaattgtagttaatatacaacca
acactaattcaaaccagtaatggtccttacggagcttcaaatagtgttgggcaaggttca
gttttaccaacatctccttcagggggaagcacggattccttgggtgcaagcagatcaact
ccttcagtttctggaatcaacacctctagctttgtttccagaagtggttatacatgccaa
cagctgtcttgcttactgatccaagcttgtggtctcctgttggctcagctcccacctgat
tttcacatgcaactttatatggaggcatcacgtattataaaagaaagttggtggctcgct
gatgggaaaaggtcactgggtgaactggactctgctgtcggctatgctttgctggatcca
acatgggcggctcaagacaatacgtcaacagccattggtaatattgttgccttgcttcat
tctttcttcagtaacctaccacaagaatggctagaagggacacatgtaatcattaaacat
ctccggcccataacgtcagtagcaatgttgagaatagtgttccgaataatgggcccattg
cttcctagacttgtcaatgctcacacactcttcaataagacacttgcattgcttctgaat
acaatgggagatgtttacgggaagaacacactaccaccggctcctgttgaagcatcagaa
atagcagatctcattgacttcctccatcatgttgtccattacgaaggacaaggaggacct
gtgcaggccagcagcaagcctagaccagaggttttggtgcttattgggagagcagcagaa
agtctccatccagaagtacagcatcttctttcccacttgaaacctgatgtgaattcttct
atatatgctgcgacccacccaaaaatggtgcaaaacccctcttga

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