Citrus sinensis (Valencia orange): 102623127
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Entry
102623127 CDS
T02983
Name
(RefSeq) peroxisome biogenesis protein 12 isoform X1
KO
K13345
peroxin-12
Organism
cit
Citrus sinensis (Valencia orange)
Pathway
cit04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
cit00001
]
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
102623127
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cit04121
]
102623127
Ubiquitin system [BR:
cit04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Peripheral membrane proteins
102623127
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pex2_Pex12
zf-C3HC4_2
zf-C3HC4_3
zf-C3HC4
zf-RING_UBOX
zf-RING_2
PRIMA1
NinF
zf-rbx1
APC_N_CC
FXR_C1
Motif
Other DBs
NCBI-GeneID:
102623127
NCBI-ProteinID:
XP_006470919
LinkDB
All DBs
Position
8:join(20139537..20139644,20139999..20140104,20140392..20140540,20140761..20141010,20141549..20141658,20141892..20141966,20142119..20142205,20142452..20142538,20142870..20143007,20143396..20143467)
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AA seq
393 aa
AA seq
DB search
MLFQVGGQGTRPTFFEMAAAQQLPASLRAAVTYSVGVLALRRPFLHKVLDYEDEFFALLM
LILETHSLRNTDASFSESLYGLRRRSVRIRAKKDDTRLKSSDGIHHSGLEKRQRVLSVVF
MVVMPYFKSKLHSVYNKEREARLQASLWGPTDERFDDADYFGGGGNPLVSRGGTDAETSV
RTRLTKKIQKTIFACYPWLHASCEGLSFTYQLLYLLDATGFYSVGLHALGIHVCRATGQE
LMDNSSRISKIRSRERERLLGPLWLKKLQGALLSCAYTMLDYAQTGLIAAVFFFKMMEWW
YQSAEERMSAPTVYPPPPPPPPPKVAREGIPLPPDRTICPLCSQKRANPSVVTVSGFVFC
YACIFKYVSQYKRCPVTLMPATVEQIRRLFHDM
NT seq
1182 nt
NT seq
+upstream
nt +downstream
nt
atgttgtttcaggtgggaggacaaggcacacggccaacgttcttcgagatggcggctgct
cagcagctgcccgccagtcttcgagccgctgtcacttactctgttggcgttttggcatta
agaagaccgtttctccataaagttttagactatgaagacgagttctttgctttgcttatg
ctgattctcgaaacccacagtttgcgaaatacagatgcctctttttctgaatcgctatat
ggtttgcgaaggagatctgtgagaataagagcaaaaaaggatgatactcgattgaagtcc
agtgatgggattcatcattctgggttagaaaagcgccaaagggttctttcagttgtattt
atggttgtgatgccgtattttaagtcgaaattgcattcagtctacaacaaggaaagggaa
gccaggctacaagcaagtttatggggacctactgatgaaagatttgatgatgcagactat
tttggtggagggggtaaccctcttgtttctaggggaggtacagatgcagaaacatcagtt
agaacacgtttaacgaagaaaattcagaaaacaatatttgcttgctatccatggctacat
gctagctgtgaaggattatcattcacttatcagctcttatatctgctggatgctactggc
ttctattctgtaggattgcatgcccttggaatccatgtttgtcgagctacagggcaagag
ctgatggataattcttctagaatatccaagatacgaagccgtgaacgtgagagacttctc
ggccctctatggttgaagaaattacaaggagcattacttagctgtgcatacacgatgctt
gactatgcacagactggcttgattgcagcagtattcttttttaaaatgatggaatggtgg
taccaatctgctgaggagagaatgtcagccccaacggtgtatccaccacccccaccacct
ccacccccaaaggttgccagagagggtattccactgccacctgatagaacaatctgccca
ttatgctcacagaagcgtgcaaatccatctgtagttacggtctcagggtttgtattctgc
tatgcttgcatattcaagtatgtttcacagtataagcgctgcccagtgacattaatgcca
gcaactgttgagcagataaggagactctttcacgatatgtag
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