KEGG   Citrus sinensis (Valencia orange): 102623196
Entry
102623196         CDS       T02983                                 
Name
(RefSeq) pre-mRNA-processing protein 40A-like
  KO
K12821  pre-mRNA-processing factor 40
Organism
cit  Citrus sinensis (Valencia orange)
Pathway
cit03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cit00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    102623196
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:cit03041]
    102623196
Spliceosome [BR:cit03041]
 Complex A
  U1 snRNP components
   U1 related factors
    102623196
 Complex B
    102623196
SSDB
Motif
Pfam: FF WW WW_TCERG1 FF_RHG35_4th
Other DBs
NCBI-GeneID: 102623196
NCBI-ProteinID: XP_006486888
LinkDB
Position
8:join(1751102..1751134,1751317..1751658,1751751..1751945,1752101..1752177,1753122..1753191,1755900..1755952,1756046..1756103,1756225..1756583,1756671..1756743,1757059..1757154,1757247..1757315,1757388..1757465,1757642..1757728,1757822..1757856,1757987..1758092,1758223..1758303,1758381..1758473,1758568..1758621,1758716..1758832,1758967..1759065,1759614..1759661,1759737..1759829,1759916..1760023,1760360..1760424,1760949..1761051,1761795..1762073,1762211..1762345)
AA seq 1001 aa
MANNAPYSGAQFRPAVPAPQSQQYVPVASQHFPPAGQGVSVMNAGLPSQNMQPQFPQLMH
QLPARPGQPAPSHGPPPPQVVPLPNAQQSNHIASGSSLPQANVQAPTSYASSLGGLARPF
SASYTFAPSSYGQPQGTVNVNTGNQYQPMSQMHVPSNPAGGQLGVSISQSTSTPLQHTHE
QVAANTAPTMASTFQPKSAEVAQTDWIEHTAADGRRYYYNKRTRQSTWDKPLELMTPIER
ADAASDWKEFTSPDGRKYYYNKVTKQSKWSIPDELKLAREQAERASTKGTQSEASPNLQT
SNSVPSSAVTASPNADISSSTVQVVASSPVSVVPIIAASSIQPAMVSASSASPVIASSVA
VSADGIQTTVDALTPMISVSSSVGDAVTVNTDTETKNYSSNLPASNVVAAAVEVPAQETE
EMRKDAVTGEKIGDELEEKTVGQEHLAYANKLEAKNAFKALLESANVGSDWSWDQAMQAI
INDRRYGALKTLGERKQAFNEYLGQRKKQEAEERRFKLKKAREDYKKMLEESVELTSSTR
WSKAVTMFENDERFKALDRERDRRDLFDDHLEELRQKERAKAQEERRQHLIEYRQFLESC
DFIKASTQWRKVQDRLEADERCSRLEKIDRLEIFKEYIIDLEKEEEEQRKIQKEVLRRAE
RKNRDEFRKLLEGDVASGTLTAKTHWRDYCMKVKDLHAYMAVASNTSGSTPKDLFEDVAE
ELQKQYQEDKTRIKDAVKLKKISLSSTWTFEDFKASILEDVTSPPISDVNIKLVFDDLLE
RVKEKEEKEAKKRKRLADDFFALLCSIKEISASSAWEDCIQLFEGSREFSSIGEESICRE
IFDEYVTQLKEQAKENERKRKEEKSKKEKEREDRDRKKQKQGREKDRAREREKEDHSKKD
GAESDHDDSTEYENKRSGKDSDKKHRKRHHSGQDSLDENEKDRSKNSHRSDRKKSRRHAS
TPESDNESRHKRHKRDHRNGSRKNGDHEELEDGEVGLEGEK
NT seq 3006 nt   +upstreamnt  +downstreamnt
atggccaataacgctccttattctggtgctcagttccggcctgcagttccagcgccacag
tcacaacaatatgttcctgtggcttctcaacattttccaccagctggacaaggtgtttct
gtaatgaatgctggattaccatctcaaaatatgcagcctcaatttcctcaacttatgcat
cagttaccagcaagacccggccaaccagctccaagccatggtccaccaccaccccaggtg
gtaccattgccaaatgctcagcaaagtaatcacattgcatctggatcatcactacctcag
gctaatgttcaggctcctactagctatgcatctagtttaggtggtcttgcaagacctttc
tctgcatcatacacttttgcaccatcttcatatggccaaccacaaggaaccgttaatgtc
aatactgggaatcagtatcagcccatgtcccaaatgcatgttcccagtaatcctgctgga
ggacaacttggtgtgtccattagccagagtaccagtacacctctgcagcacacccatgaa
caagtggctgctaacactgcccccactatggcatctacttttcagcctaagtctgcagaa
gtggcccaaactgattggatagagcatactgctgctgacggaagaagatattattacaac
aagaggacaagacaatctacttgggataaacctttggaattaatgacaccaattgagagg
gccgatgcagcgtctgactggaaggaatttacaagtcctgatggaagaaagtattactac
aacaaggttaccaagcagtcaaagtggtcaatacctgatgagttgaagttggcccgtgaa
caagcagaaagagcatctaccaaaggaacacagtcagaagcatcccctaatttgcaaaca
tcaaattctgttccttcgtcagcggttacagcatcacctaatgctgatatctcatcttca
acagttcaagtggtagcatcaagcccagtttcagtggttcctataattgctgccagcagt
atacaacctgcaatggtctctgcatcttcagcctcacctgtcattgcttcgtctgtggca
gtgagtgcagatggaatccagacaactgtagatgctcttacaccaatgatttctgtatct
tcaagtgtaggagatgctgtaactgtcaatacagatacggaaacaaagaattattcaagc
aacttgccagcttctaatgttgttgctgccgcagttgaagtccctgcacaagagacagag
gaaatgcggaaagatgctgtcacaggtgaaaaaataggtgatgaattggaagagaagaca
gttgggcaggagcatttagcatatgctaataagctggaggctaaaaatgccttcaaagca
cttttggagtctgcaaatgttgggtctgactggagttgggatcaggcaatgcaagcaata
attaatgacagaagatatggtgctctaaaaacacttggagaacggaagcaagcttttaac
gagtacctgggtcaaaggaaaaaacaggaagccgaggaaaggaggtttaagctgaaaaag
gcgcgggaagattataaaaagatgttggaagagtctgtagagctgacatcatctactaga
tggagtaaagcagtgactatgttcgaaaatgatgaacgtttcaaagctctagatcgagaa
agagaccgcagggatctgtttgatgatcacttggaggaactcagacaaaaggaacgagca
aaggcacaggaggagcgccggcagcatttaatcgagtataggcaatttttagaatcctgt
gacttcattaaggcaagtacccaatggcgaaaggttcaggacaggttagaggctgatgaa
agatgttcacgccttgagaaaatcgatcggctggaaatctttaaggaatatattattgat
ttagagaaagaagaggaagagcaaaggaagatccagaaggaagtactaagaagggctgag
cgcaaaaatcgcgatgaatttcgaaagttgttggaaggagatgttgcttcaggcactctt
acagccaaaactcactggcgtgattattgcatgaaggttaaagatttacatgcatatatg
gcagtcgcctctaatacctcaggctcaactccgaaggatttatttgaagatgtcgctgag
gagctacagaaacagtaccaagaggacaagactagaatcaaagatgcagttaagctaaaa
aagatcagtttgtcgtcaacttggacatttgaagattttaaggcttctattttggaggat
gttacatctccacctatatcagatgttaatataaagctggtttttgatgacttgctagaa
agagtgaaggagaaggaggagaaagaagctaagaaacgcaaacgtcttgcagatgacttt
ttcgctctactatgttctatcaaggagatatctgcatcttcagcatgggaggattgcata
caactttttgagggtagccgagagttcagttccattggagaagaaagcatctgcagggag
atatttgatgaatatgtaacacaactgaaagaacaggccaaagagaatgaacggaaaaga
aaggaggagaagtccaaaaaagaaaaagaaagagaagatagagataggaagaagcagaag
cagggaagggaaaaagatagagcacgtgaaagagaaaaagaggatcactcaaagaaggat
ggagctgagagtgaccatgatgattcaactgaatatgagaacaaaagatcgggaaaagac
agtgacaagaaacacagaaagcggcatcacagtggccaggatagcttggatgaaaatgaa
aaagatcgatctaagaactctcatagaagtgatcgcaaaaaatcaagaaggcatgcatca
acacctgaatcagataatgagagccggcataagagacataagagggaccaccgtaatggt
tctcgtaaaaatggtgatcatgaagagcttgaagatggggaagttggtctggaaggtgaa
aagtag

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