Citrus sinensis (Valencia orange): 102623213
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Entry
102623213 CDS
T02983
Name
(RefSeq) cyclic nucleotide-gated ion channel 1-like
KO
K05391
cyclic nucleotide gated channel, plant
Organism
cit
Citrus sinensis (Valencia orange)
Pathway
cit04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
cit00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
102623213
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cit04040
]
102623213
Ion channels [BR:
cit04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
102623213
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
cNMP_binding
IQ
DUF2985
Motif
Other DBs
NCBI-GeneID:
102623213
NCBI-ProteinID:
XP_006490520
LinkDB
All DBs
Position
9:complement(join(961992..962660,962771..963007,963103..963214,963308..963588,963685..963897,963995..964511,964601..964602))
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AA seq
676 aa
AA seq
DB search
MSRKWDLEQGTAGRVTGEPRNGTNSVSVKFQRDENSGVKINGIIGLPGRWFCTVIKHLLY
IKKLIDPRGPSGSLVCLIFCVIAIFLDPLFFYIPVTNDDKKCLRLDKNLGIAAIVLRSVF
DVFYTIYIIFNLHSDVFASSSLIHKEENSKKFARKNLLHFFLIDLLAILPLPQVVILIIM
PTMRGSKFLDAMKLLKFLVFFQYVPRVIRIYPLFTKATRNSSKLDEATWAKAVFNLLLYL
LAAHVFGALWYFFSIERETVCWKSACRKHAGCNHGSFYCDDHSGDYTFLNEFCPIKPQNT
KIFDFGIFHDALESGIVEMTDFPQKLLHCFFWGLQSLSCLGQNLNTSTYIWEDFFAILIT
ISGLMLFLFLIGNMQIYLQSKTIRSEEMRLKVREIEQRMPFQKLSGNLQQQIKKYQQYVW
RETKGVDVENLISNLPRDLRRNIKRELCLDLLKKVEEFKKLDEATLDALCDCVKPAFFIE
RAHIVREDYPIDEMLFVVQGKLWNYTSKSRASGSARFNNHRDNDNKSKKDHLKDGDFCGE
ELVAWAMDDPSSSNLPISTRTIQALTKVEAFALMADDLKNVFINHQLCTYSELNWKNLMT
QAARVIQDAWRRYHTRRNSTRSTGEIDSSLQVAISQGASLLNALQGINFPNRTPQYLPQP
QGETETIVEEPEFNIT
NT seq
2031 nt
NT seq
+upstream
nt +downstream
nt
atgtcacggaaatgggatttagagcaaggtacagcagggcgtgtaactggggaaccaaga
aatggaacaaactctgtctctgtcaagttccaaagagatgaaaattccggtgttaagatt
aacggcattataggattaccaggacgttggttttgcactgtaatcaaacacttgctttac
atcaagaaactgattgatccacgagggccttctggcagtttggtttgtctcatattttgt
gtgattgcaattttcttggatcctttgttcttctacattcctgtgaccaatgacgataaa
aagtgccttagattggacaaaaacttggggattgcagctatcgttcttcgttccgtcttt
gatgtcttttatacaatctatatcatcttcaacctccattctgatgtttttgcttcttct
tctttgatacacaaagaagaaaattcaaagaaatttgcaaggaaaaatttgttgcatttc
tttctcattgaccttcttgccattctccctctcccacaagttgtaattttgattatcatg
ccaacgatgagaggctcaaaatttttagatgcaatgaagttgttgaaatttttagttttt
ttccaatatgtgccaagggttattagaatttatccattgtttacgaaggctacaaggaat
tccagcaaacttgatgaagctacatgggctaaagctgtatttaaccttcttctttacttg
cttgctgctcatgtattcggagctttgtggtactttttctccattgaaagagagactgta
tgctggaaaagtgcttgcagaaagcatgctggatgcaatcatggttcattttactgtgat
gaccattcaggagactacacatttctaaatgaattctgccccataaagccacaaaataca
aagatatttgattttggaatatttcatgatgctcttgaatctggtattgtggagatgact
gattttcctcagaagttgctgcattgtttcttttggggactgcaaagtcttagttgtcta
ggtcaaaacctcaacacaagtacttacatctgggaagacttttttgcaattctaattacc
atctctggcttgatgttgtttctctttctcattggaaatatgcagatatatctgcagtca
aaaactataagatcagaggagatgagactgaaggtgcgagagatagagcagcggatgcct
tttcaaaagctctcaggaaatctgcagcagcagattaagaaataccagcaatacgtatgg
cgagaaaccaaaggtgttgatgttgaaaatttgataagtaatcttcctagggaccttaga
agaaacataaagcgcgaactgtgcttggacctgctcaagaaagtagaagagtttaagaaa
ttagatgaagcgacactggatgcattgtgtgattgtgtaaagccagctttcttcattgag
cgggcacacattgtccgggaggattacccaatcgatgaaatgctctttgtagtgcaaggc
aaactatggaactacacctccaagagcagagcatccggctctgcaagattcaataatcac
agagacaatgataacaaaagcaaaaaggatcatctgaaagatggtgacttttgtggtgaa
gagcttgttgcttgggctatggatgatccctcttcatcaaatctgccaatatcaaccaga
actattcaagcacttacgaaagttgaagcttttgctcttatggctgacgacttgaaaaat
gtattcattaaccaccagctttgtacctattccgagttaaactggaaaaatttgatgact
caggcagctcgtgtcatacaagatgcttggcgtcgctatcatactagaaggaattcaaca
agatctactggtgaaattgattctagcctgcaagttgcaatatcacaaggtgcttcatta
ttaaatgctttacagggtatcaattttcccaatagaacaccacaatacctgcctcagccg
caaggagagactgaaaccattgttgaagagccggagttcaatatcacctaa
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