Citrus sinensis (Valencia orange): 102623427
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Entry
102623427 CDS
T02983
Name
(RefSeq) truncated FRIGIDA-like protein 1 isoform X1
KO
K27812
FRIGIDA-like protein 1/2
Organism
cit
Citrus sinensis (Valencia orange)
Brite
KEGG Orthology (KO) [BR:
cit00001
]
09190 Not Included in Pathway or Brite
09192 Unclassified: genetic information processing
99973 Transcription
102623427
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Gene cluster
GFIT
Motif
Pfam:
Frigida
Motif
Other DBs
NCBI-GeneID:
102623427
NCBI-ProteinID:
XP_006474949
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Position
9:join(28123744..28124617,28125795..28125970,28126068..28126655)
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AA seq
545 aa
AA seq
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MATLEAIAAAIKEIDSKKLNLKKAFDDLQSHSSLLSSFPLNWSDLDAHYTHVQNNLTHRF
RLLESLASTQSQSPPGRGDSVHDPPPSQDRNDSAPTLPESQLPTQSKPQADPLVSVPVVS
VVARPELKALCENMDGNGLRKYINDNPKERELIRLELPDAIRVAPDPGLMVLEAVEGFYG
VNSHLKGNKNPELCGFRRACVLLLEVLMGINVDIGSEVREKAKTVAFEWKQKVKLDEESS
FEALGLLHLVAAYGLGCEFEKNDLVEYFVIVAKYRQSTLLCKVIGLGDKVQDLVQKLIDN
GKHLLAVKYVFELQLTSKYPPVPILETYVKESNKIAMKICEDGKNSLKSQNEATAKEIGA
LKAVIKVIEEHKLESEYPKGTLEKRIEQLEKQKANRKRPAPAPAAKPQQQQRNPQQGGKK
RSRPTASVGHPPPSLSCVNSTVPLVQQPHIQPAGLMPDNSAAYLNTAPGPYNLVGSSPAV
APYAGSSACLYGLTGGPMGFPGNSNHATSHFYNPEQHMPSGHYDRSTAYGGYGVPPQYQS
SYYPQ
NT seq
1638 nt
NT seq
+upstream
nt +downstream
nt
atggcgacactggaggcaatagcagcggcaataaaagaaatagacagcaaaaaactaaac
ctcaagaaagcgttcgatgacctgcaatcccactcctcgcttctctcttccttccctctc
aattggtccgatttggacgcccactacacccacgtccagaacaacctcactcaccgcttc
cgcctcctcgaatcgctcgcctccactcagtcccaatctcctcccggccgaggcgactca
gtacatgaccctcctccgagtcaggaccgaaatgactcggcaccgactcttccggagtcg
caattaccgacccagtcgaaacctcaggcggacccgttggtttctgtccctgtcgtctca
gttgtggctcggccggagttgaaagctctgtgtgagaatatggacggtaatgggttgaga
aaatacattaacgacaacccaaaagagcgagaattgattcggcttgagctcccagatgct
atccgggtcgcccctgatccgggtttgatggtcttggaggctgtggaagggttctatggg
gttaatagtcacttgaaaggcaataaaaacccggagttgtgcgggtttaggagggcttgc
gtgttgttattggaggttttgatgggaattaatgtggatattgggagcgaagtgagggag
aaagcaaaaacggtggcctttgagtggaaacagaaggtgaagttggatgaggagagtagt
tttgaggcactggggttgttgcatttagtggcggcgtacgggttgggatgtgagtttgaa
aagaatgatcttgttgagtactttgtcattgttgcaaagtaccggcagagtaccttgttg
tgcaaggtaattgggttgggagataaggttcaagatctcgtccaaaaacttatagataat
ggaaaacaccttctggcagtcaaatatgtttttgagttgcagctgactagtaaataccca
ccagttcccatcctggaaacctacgtgaaggaatccaataagatagctatgaagatttgc
gaggatggaaaaaactctcttaaatcacagaatgaggccacagccaaggaaattggtgca
ttgaaagcggtgattaaagtaattgaagagcacaaacttgaatctgagtacccaaagggg
acacttgagaagcgtatcgagcagttagagaagcagaaagctaataggaaacgccctgct
cctgctcctgctgccaagcctcagcagcaacaaaggaacccacagcagggtggaaaaaag
cgttctcgtcctactgcttctgttggccatccaccacctagtctttcttgtgtcaattca
actgttcccctagtccaacaacctcatatacagccagcaggtttgatgcctgataattct
gctgcgtatttgaacacagcacctgggccatacaacttggtaggctcttctcctgctgtt
gccccttacgcgggctcatcagcctgtctgtatggtttgacaggaggccctatgggtttc
cctggcaattcaaatcatgctacatcacatttttataatccagaacaacacatgccatcg
ggccattatgacagatcaactgcctatggtggatatggtgtgcctcctcaataccagtcg
tcttactatcctcagtag
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