Citrus sinensis (Valencia orange): 102623467
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Entry
102623467 CDS
T02983
Name
(RefSeq) amino acid transporter AVT1C
KO
K15015
solute carrier family 32 (vesicular inhibitory amino acid transporter)
Organism
cit
Citrus sinensis (Valencia orange)
Pathway
cit04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
cit00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
102623467
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cit02000
]
102623467
Transporters [BR:
cit02000
]
Solute carrier family (SLC)
SLC32: Vesicular inhibitory amino acid transporter
102623467
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Aa_trans
Motif
Other DBs
NCBI-GeneID:
102623467
NCBI-ProteinID:
XP_052296011
LinkDB
All DBs
Position
4:complement(join(5028677..5028775,5028864..5028926,5029035..5029078,5029196..5029337,5029463..5029486,5029716..5029851,5029996..5030215,5030619..5030799,5031374..5031612,5032581..5032903,5033718..5033911))
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AA seq
554 aa
AA seq
DB search
MKNSVSDHSFYIESDEEEDEEKVFDVNGGEEDQEENDGNDSDSSAENQQQTHPGSYNTSW
PQSYRQSIDLYSSVPSPSLTFLGTPSLSRLSSSFLSSSLTRRHTPESLAATTKPLLPTVA
YEQPQQQRRSSHTLLPPFPSRRSSLIKDSKSSRVSHEHPISRQSSYAQALLNGMNVLCGV
GILSTPYAAKEGGWFGLLILVAFGVLSFYTGILLRRCLDSEPGLETYPDIGQAAFGTAGR
IAVSVILYAELYACCIEYIILESDNLSSLFPNAHLSFGGFYLNSHHLFALMTTLAVLPTC
WLRDLTVLSYISAGGVIASILVVLCLFWVGLVDQVNIHSKGTPLNLATLPVAIGLYGYCY
SGHAVFPNIYTSMAQPNQFPKVLITCFLICTAMYAGVAYMGYTMFGESTLSQFTLNMPQD
LVATKIAVWTTVVNPFTKYALTISPVAMSLEELIPSNHLKSHIYAICIRTALVISTLLVG
LAIPFFGLVMSLIGSLLTMLVTLILPCLCFLSILRGKATRLQVALCVIIIVAGVVSSAIG
SYSAILKIVESLSS
NT seq
1665 nt
NT seq
+upstream
nt +downstream
nt
atgaagaactcagtttcggatcacagtttctacattgagagtgacgaagaagaagatgaa
gagaaggtgtttgatgtaaatggaggcgaagaagatcaagaagaaaatgatggaaatgat
tctgattcttcagccgaaaatcagcagcagactcatccaggttcttacaacacttcttgg
cctcaaagttacaggcagtctattgatctttatagtagtgtcccatctccaagtcttacc
tttttgggcactccttcactgtcaagattaagcagttcctttctttcctcatcgctgaca
agaaggcatactcctgaatcattagctgccacgacgaaacctctgctaccaacagtagca
tatgaacaaccccagcaacaaaggcgtagttctcatactttgcttcctccttttccatca
aggagatcttctctaatcaaggattcaaaatcatcccgtgtctcacatgaacacccaatt
tcacgccagagctcatatgcacaagctctgcttaatggcatgaatgttctatgtggagtt
ggaattctatctacaccatatgcagctaaagaaggaggatggtttggacttttgattttg
gttgcatttggagtgctttctttctacactggaatacttttgcgtcgctgcctggatagt
gaacctgggctggagacttacccagatataggccaagctgcatttggtacggcagggaga
atagccgtttcagtaatactatatgcggaactctatgcttgctgtattgaatacataatt
ttggagagtgataacctatcgtcactattcccgaatgcacatttaagttttggtggattt
tatctaaattcacatcatttgttcgccttgatgactaccctcgctgttcttcctacttgt
tggctaagagacctcacagttcttagttacatatctgccggtggagttattgcatcaatc
ttagtggtcctctgcttgttctgggttggtctggtagatcaggtcaacattcatagcaaa
ggaacaccgctgaacctagctactcttcctgtcgctattggtctctacggttactgctac
tctggacatgctgttttcccaaacatctatacttcaatggcacaacctaaccaatttccg
aaggtccttattacatgttttcttatttgtacggcaatgtatgctggagttgcttatatg
gggtacacaatgtttggagaatcaacgttgtcgcagttcacccttaacatgccgcaagat
ttggttgccacaaaaattgccgtttggactacggtggtcaacccatttaccaaatatgca
ttaaccatttctccggtggcaatgagtctagaagagttgataccatcaaaccatctcaag
tctcacatttacgctatctgcattagaaccgcactggtgatctcaaccttgcttgttggc
cttgccatcccctttttcggcctggtaatgtcactaatcggatctttactcacaatgctc
gtgaccttgatacttccttgcctttgttttctgagcatcctaaggggcaaagcaacccgg
ttacaagttgctctttgtgttataatcattgtggcaggggttgtatcgtcagcgattgga
tcttattcggccattttaaaaattgttgagagtttgagcagctga
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