KEGG   Citrus sinensis (Valencia orange): 102623615
Entry
102623615         CDS       T02983                                 
Name
(RefSeq) DNA excision repair protein ERCC-1 isoform X1
  KO
K10849  DNA excision repair protein ERCC-1
Organism
cit  Citrus sinensis (Valencia orange)
Pathway
cit03420  Nucleotide excision repair
cit03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:cit00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    102623615
   03460 Fanconi anemia pathway
    102623615
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:cit03400]
    102623615
DNA repair and recombination proteins [BR:cit03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     102623615
SSDB
Motif
Pfam: Rad10 HHH_5 HHH_2 HHH HRDC Auts2
Other DBs
NCBI-GeneID: 102623615
NCBI-ProteinID: XP_052298015
LinkDB
Position
5:join(27068310..27068554,27068652..27068748,27069140..27069243,27069820..27069919,27070131..27070207,27070556..27070655,27070802..27070873,27070958..27071026,27071222..27071542)
AA seq 394 aa
MENEEQNNESAKAQPPQNKKKTIITIPSYQEVINATNPPQNLFTPSQSFSQAFSFIKSSE
FYNPPPPPPANPPTTSQNPTLSQGGEQNVGTASASASSSQSIQSRNAILVSQRQKGNPLL
KYIRNVRWAFADVVCDYLLGQNSCALYLSLRYHLLHPDYLYYRIRELQKNFKLRVVLCHV
DVEDVVKPLLEVTKTALLHDCTLLCAWSLEECGRYLETIKVYENKPADLIQGQMDTDYLS
RLTHALTSVRSVNKTDVVTLGSTFGSLLHIMDASMEDLARCPGIGERKVKRLYDTFHEPF
KRVVSSHPPIPETPSQKDVERSSVNEVTEVEKDTEDVNKRRKKETESTVKSALSAAFAKY
ADKIGKKQICSSQVGETSVSNSGAENSNSGQPDS
NT seq 1185 nt   +upstreamnt  +downstreamnt
atggaaaacgaagaacaaaacaatgaatcagcaaaagcacagcctccccagaacaagaaa
aaaacaataatcacaataccatcataccaagaagtcataaatgcaacgaacccgccacaa
aatctcttcaccccatctcagtctttctctcaagctttctctttcatcaaatcctctgag
ttttacaatcctcctcctcctcctcccgctaatccaccaaccacttcccagaatcccact
ttaagtcaaggtggtgaacagaatgtggggactgcttcagcttcagcttcttcgtcacag
tccattcagagccgtaatgcaattcttgtcagtcaaagacagaagggtaatcccttgctg
aagtatataagaaatgtgagatgggcttttgcagatgttgtttgtgactacttgcttggg
cagaactcatgtgctctttatctaagtcttcggtatcatctactgcatccagattaccta
tattaccgtataagggaattacaaaagaacttcaagctacgcgttgttttatgccatgtt
gatgtggaggatgtagttaagcctttactcgaagttactaagacagcactgcttcatgat
tgtaccctgttatgtgcttggagcttggaggaatgtggtcgctacttagagactataaaa
gtctatgagaacaagccagcagaccttatccaaggccaaatggataccgactatttatcg
cggctaacccatgcccttacatctgttcggagtgtcaacaagactgatgttgtcacccta
gggtctacatttgggtctcttttgcatatcatggatgcatcaatggaagacctggctcgt
tgccctggcatcggagagcgcaaggttaaacgcttgtatgacacttttcacgagccattt
aagcgtgtagtttccagtcaccctcctattccggaaactccttcccagaaggatgttgaa
cgttcctctgtgaatgaagtaacagaagtggagaaagacacagaagacgtaaacaaacgt
aggaagaaagaaaccgaatcaactgtgaagtcagccctatctgctgcatttgccaagtat
gctgataaaattggtaagaagcaaatctgttcatctcaggtaggggaaacaagtgtttcc
aattcaggcgctgaaaatagcaattccggtcaaccggacagctaa

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