Citrus sinensis (Valencia orange): 102623750
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Entry
102623750 CDS
T02983
Name
(RefSeq) eukaryotic translation initiation factor 3 subunit C
KO
K03252
translation initiation factor 3 subunit C
Organism
cit
Citrus sinensis (Valencia orange)
Brite
KEGG Orthology (KO) [BR:
cit00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
cit03012
]
102623750
Translation factors [BR:
cit03012
]
Eukaryotic type
Initiation factors
eIF-3
102623750
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
eIF-3c_N
PCI
Motif
Other DBs
NCBI-GeneID:
102623750
NCBI-ProteinID:
XP_006481681
LinkDB
All DBs
Position
6:complement(join(19861477..19862406,19863263..19865053,19865206..19865229))
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AA seq
914 aa
AA seq
DB search
MASRFWTQGGSDSEEESSDYEDDVENEGVETTTQTAGSRYLQANASDSDDSDGQKRVVRS
AKDKRFEEMAATVDQMKNAMKINDWVSLQESFDKINKQLDKVMRVTEAEKVPTLYIKALV
MLEDFLNQAMANKEAKKKMSSSNAKALNSMKQKLKKNNKQYEDLINKYRENPESEEVKDE
DEESEEEEEDEDEEFEEDPDNIRAGSGSDNDDDDDGEEAEDANDSGWVRQTGRRDKSIDK
QFKNPSEITWETVNKKFKEVVAARGRKGTGRFEQVEQLTFLTKVAKTPAQKLEILFSLIS
AQFDVNPGLSGHMPINVWKKCVVNMLIVLDILTQYPNIVVNDMVEPDENETQKAADYNGT
IRVWGNLVAFVERIDIEFFKSLQSIDPHTREYVERLRDEPMFLVLAQDVQEYLEQAGEFK
AASKVALRRVELIYYKPQEVYDAMRKLAEQTDEGDNGEKAIEEESRGPSAFISVPELVPR
KPTFPENSRTMMDMLVSLIYKYGDERTKARAMLCDIYHHALLDEFSTARDLLLMSHLQDN
VQQMDVLSQILFNRAMAQLGLCAFRVGLNAEGHSCLSELYSGGKVKELLAQGISQSRYHE
KTPEQERLERRRQMPYHMHINLELLEAVHLICAMLLEVPNMAANTHGAKSKVISKTFRRL
LEVSERQTFTGPPENVRDHVMAATRALTKGDFQKAFDVINSLDVWRLLRNRESVLEMLKA
KIKEEALRTYLFTFTSSYDSLSLDQLTKMFDLSEVQTHSIVSKMMINEELHASWDQPTRC
IIFHDVEHSRLQALAFQLTEKLSILAESNERAMESRTGGGLDLSLRRRDNQDYAAVTGAM
GGKWQDNLSYNQGRQGRSGFTGGGGRSLALGQAGGYSRGQLRGSGGYSGRAAAARGSQMD
GSNRMVSLNKGVRV
NT seq
2745 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcgagattttggactcagggtggaagtgactccgaggaggagagtagtgactat
gaagatgatgttgaaaacgagggagttgagaccaccacccaaactgctggaagcaggtac
ctgcaggctaatgctagtgatagtgatgattctgatggtcagaaacgtgttgttaggtct
gctaaagacaagcggtttgaggagatggcggcaactgttgaccagatgaagaatgctatg
aaaatcaatgattgggttagcttgcaagagagttttgacaaaattaataagcagcttgat
aaggtcatgagggtgactgaggccgagaaggtccctactctttacatcaaagctcttgtg
atgttggaggactttttgaatcaagcgatggcaaataaggaagcaaagaagaagatgagt
agcagcaatgctaaggccttgaattcaatgaagcagaagctgaagaagaataataagcag
tatgaggatttgattaataagtacagagagaatcctgagagtgaggaggtgaaggatgag
gatgaggaatcagaggaggaggaagaggatgaggatgaagagtttgaggaggatcctgac
aacattagggccggatcaggatctgataacgatgatgatgacgatggagaggaggctgag
gatgctaatgacagtggttgggtgaggcagacgggtaggagagataagtcaatagacaag
caatttaagaatcctagtgagatcacttgggaaactgttaacaaaaagtttaaggaggtt
gtggctgctcggggtaggaagggaactggaaggtttgagcaggttgagcaacttaccttc
ttgacgaaggttgctaagactcctgctcagaagttggagattctttttagtcttatctca
gctcaatttgatgttaatcctggtcttagtggacacatgcctattaatgtctggaagaag
tgtgtggtgaatatgcttattgtacttgacattcttactcagtatcctaatattgtggtt
aatgacatggttgagcctgatgagaatgagacacagaaggcagcagactataatggaact
attagggtgtggggaaatttggtggcctttgttgagagaatagatatagagtttttcaag
agcttgcaaagcattgacccgcacacacgtgagtatgttgaaaggcttagggatgaacct
atgtttttggttcttgcacaagatgtccaggaatatttagaacaggctggggaatttaaa
gctgcttccaaggttgctctaaggcgtgttgagctcatttattataagccacaagaggtt
tatgatgctatgaggaagttggctgagcagacagacgaaggagataatggagaaaaagcc
attgaggaggagagtaggggcccttctgcatttatttctgttcctgagcttgtgcctcgg
aaaccaacctttcctgaaaatagcagaacaatgatggatatgcttgtatcccttatatac
aagtatggagatgagaggacaaaggcccgtgcgatgctttgcgatatttaccatcatgcg
ctcttggatgaattttcaactgcccgtgacttgctgcttatgagtcatctacaagataat
gttcagcaaatggatgttctatcccagattcttttcaatagagctatggcacagcttggt
ctttgtgcatttcgtgttggactgaatgctgaaggacacagctgcctttctgagctgtat
tcgggtggaaaggtgaaggagttgcttgcccaaggtatttcacaaagtagatatcatgag
aagactccagaacaggaaaggctggaaaggagacgtcagatgccataccatatgcacata
aatcttgagctcctggaggctgtccatctgatttgtgcaatgcttctcgaggtgcctaac
atggcagccaatacccatggtgctaagagcaaggtcataagcaagactttccgccggttg
cttgaggtgagtgagaggcaaacttttaccggcccccctgaaaatgtaagggatcatgta
atggcagccaccagggctctcaccaagggagacttccagaaggcttttgatgttatcaat
tctcttgatgtctggaggctactcaggaaccgggagagcgtgcttgagatgcttaaggcc
aagattaaggaagaggctctgaggacgtacctttttaccttcacctcatcttatgattca
ctaagcttggaccaactcacaaaaatgtttgacctttcagaagtgcaaactcacagcata
gttagtaagatgatgatcaatgaggaacttcatgcaagttgggaccagccgacccgttgc
atcatcttccacgacgttgagcactcaaggttgcaggctctggcattccagttaacagag
aagctgtccatcctcgctgaaagtaatgaaagagcaatggagtcaaggactggtggtgga
ttggacctgtctcttaggcggagagataatcaagactatgcagctgtgacaggtgctatg
ggtggcaagtggcaggacaacttatcctacaatcagggaaggcaaggccgatcgggtttt
actgggggtggtggaaggtcattggcactaggccaagccggtggttattctaggggccaa
ctacgaggatctggtggatattctggaagggctgcagctgctaggggatctcaaatggat
ggttcgaaccgaatggtcagtcttaacaagggagttcgggtttaa
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