KEGG   Citrus sinensis (Valencia orange): 102623823
Entry
102623823         CDS       T02983                                 
Name
(RefSeq) protein REDUCED CHLOROPLAST COVERAGE 2
  KO
K03255  protein TIF31
Organism
cit  Citrus sinensis (Valencia orange)
Brite
KEGG Orthology (KO) [BR:cit00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03012 Translation factors [BR:cit03012]
    102623823
Translation factors [BR:cit03012]
 Eukaryotic type
  Initiation factors
   Initiation associated factors
    102623823
SSDB
Motif
Pfam: TPR_12 TPR_10 eIF3_p135 TPR_NPHP3 CLU_N TPR_2 TPR_9 TPR_MalT CLU TPR_8 PAM2 DUF5969
Other DBs
NCBI-GeneID: 102623823
NCBI-ProteinID: XP_006474058
LinkDB
Position
9:complement(join(33165389..33167440,33167548..33167626,33167784..33167896,33167982..33168113,33168405..33168588,33168722..33168855,33169181..33169285,33169378..33169479,33169566..33169658,33169751..33170068,33170792..33170893,33170978..33171040,33171209..33171731,33171980..33172137,33172223..33172747,33172860..33172901,33173042..33173173,33173269..33173333,33173628..33173963,33174089..33174161,33174844..33174936,33175604..33175665,33176061..33176130))
AA seq 1851 aa
MAPKTGKAKPHKAKGEKKKKEEKVLPTVTEITIETPDESQVTLKGISTDRILDVRKLLGV
HVETCHLTNFTLSHEVRGSKLKDSVDVVSLKPCHLTVEEEDYSEEQAVAHIRRLLDIVAC
TNSFGASPKPPGRTSAGSNIESEPTSPNGGDSKPNKAGENRAGVCVGHVAKSGKDTSEIT
EKGDAVSMCPPPRLGQFYDFFSFSHLTPPLQYIRRSTRPFLEDKTDDDFFQIDVRVCSGK
PMTIVASREGFYPAGKRPLLFHSLVSLLQQISRPFDAAYKALMKAFTEHNKFGNLPYGFR
ANTWVVPPVVADNPSIFPHLPVEDENWGGSGGGQGRDGKHDNRQWAREFAILAAMPCKTA
EERQIRDRKAFLLHSLFVDISLFKAVAAIKTLIESNQHSLNDPAASIVHEERVGDLIIKV
ARDVPDASVKLDCKNDGSQVLGMSQKDLTQRNLLKGITADESTTIHDTSTLGVVIIRHSG
YTAVVKVSAEVNWDGHPIPQDIDIEDQTEGGANALNVNSLRMLLHKSSSPQSSSAFQRSQ
STDFENLRSARSLVRKVIEDSLLKLQEEPSKHTRSIRWELGACWVQHLQNQASGKNESKK
TEEPKLEPAVKGLGKQGALLKDIKKKTDGRINKTEQGKQVPADNNLDMNKKSDATDQKEL
EKRDEEMEELWKKLISESAYLRLKESETGLHLKSPDELIEMAHKYYADTALPKLVADFGS
LELSPVDGRTLTDFMHTRGLQMCSLGRVVELADKLPHVQSLCVHEMVVRAYKHILQAVVA
AVDNVADLAASIAACLNILLGTPSANADEDITNEDMLKWKWVETFLLRRFGWRWNHESCP
DLRKFSILRGLSHKVGLELVPRDYDMDSESPFRKSDIISIVPVYKHVACSSADGRTLLES
SKTSLDKGKLEDAVNYGSKALSKLMSVCGPYHRMTAGAYSLLAVVLYHTGDFNQATIYQQ
KALDINERELGLDHPDTMKSYGDLAVFYYRLQHTELALKYVNRALYLLHLTCGPSHPNTA
ATYINVAMMEEGLGNVHVALRYLHEALKCNQRLLGADHIQTAASYHAIAIALSLMEAYSL
SVQHEQTTLQILQAKLGSEDLRTQDAAAWLEYFESKALEQQEAARNGTPKPDASISSKGH
LSVSDLLDYIAPDTDSKARDAQRKARAKLKGKPGQTCETVSDEYQKDEIVSPTSPVVENS
SDKENKSEVHLLEPKIEKSDSGLPDQSIMIKNDDLEQEENSDEGWQEAVPKGRSLTARRS
SGSRRPSLAKLDTNFTNVSQSSRYRGKPINFTSPKPIPSESAATSGSNLPVPKKFVKSSS
FSPKLQAASISTAGADKSSPASPASTDLLAKSAPAASSMGVQAAGKLFSYKEVALAPPGT
IVKAVAEQFPKGNPAIESSSQVNQEAAMSVVTPGDVTAVKPAEENQLVVSEGETKYSVKE
EEKTEVRDSGETLQTKRDSALVDTAAKAGKEVIGAAVGTTNTEAGNVEVLGFENSDPLKN
SNVNPSKIDGLESGSLQRCIEASPDLEPQTILTEKSTLLPEQDASFPKGKVTESPQELPN
DDIGVNPLPAQVEKRDEVETVKETTTKLSAAAPPFNPSTVPVFGSIVVPAFKDHGGILPP
PVNIPPMLKVNPVRRSPHQSATARVPYGPRLSGGYNRSGNRVPRKQLSFPNAEHTAEVNH
FSPPRIMNPHAAEFVPSQPWIPNGYPVSPNGMPVSPNSFAVSPNGVPVMPNGFMNGMPLT
QNGIPAPIDSVDSAGVIIVDVGAEINPDDEKSSVESKVETQPTEQKPTEDSYVHNESNNP
VVEEKPTDVAPVTSGAVLAKDIFNDKPVEEKISKCWGDYSDSEAEIVEVTS
NT seq 5556 nt   +upstreamnt  +downstreamnt
atggctccgaaaacaggcaaggcaaagccacacaaagccaagggagagaagaagaagaag
gaagagaaagttttgccaaccgtaaccgagattacaatcgaaacaccggatgagtcacaa
gtcacgctcaagggtatctctacagacaggatcttggatgtgagaaagcttttaggggtc
cacgtcgagacatgccatttgaccaacttcactttatctcacgaggtacgaggatcgaaa
ctcaaagattcagtggatgtcgtctcgctcaaaccctgccacctcaccgtcgaagaagag
gactactcagaggagcaagcagtcgctcacatacgtcgactccttgacatcgtcgcctgc
acaaacagcttcggtgcatcacccaaaccgcccggtcggaccagtgccggttcgaatatc
gagagcgaaccgacgtctccgaatggaggtgattcaaagcctaacaaggcgggagagaat
agagccggagtttgcgtcggacacgtggcgaagagtggaaaggacacgtcggagattacg
gagaaaggtgacgcggtgtccatgtgtccgcctccgagactcggccagttctacgatttc
ttctctttctcgcacctcactccgccgcttcaatacattcgaaggtcgactcgtccgttc
ctcgaggataaaacagatgatgatttctttcaaattgatgttcgggtgtgcagtgggaag
ccgatgacaattgtcgcttcccgagaagggttctacccagctggaaaacgtcctcttctt
tttcactccttagtcagtttgctccagcaaataagcaggccctttgatgctgcatacaaa
gctcttatgaaagctttcactgaacacaataaatttggcaaccttccttatggttttcgg
gcaaacacatgggttgtccccccagttgttgctgataacccatctattttcccacatctt
cctgtggaagatgaaaactggggaggaagtggaggtgggcaaggaagagatggtaaacat
gataacaggcagtgggcaagagagtttgcaattttggcagcaatgccttgcaaaacagca
gaagagaggcaaattcgagatcgcaaagcctttttacttcacagtttatttgtcgacata
tcactttttaaagctgttgcagcaataaaaactctcattgagagtaaccagcactcttta
aatgatcctgctgcttcaattgtgcatgaggaaagagttggagatttaattattaaggtg
gcaagagatgtgccagatgctagtgtaaagttggactgtaaaaatgatggaagtcaggtt
cttggcatgtcacaaaaagaccttactcagagaaatttactaaaaggcataacagctgat
gagagcacaactattcacgacacttctactttgggcgttgtgattatcagacattctggt
tatacagctgttgtaaaagtttcagcagaggtgaattgggatggacatcctattccgcag
gacattgacattgaggaccagactgaaggaggtgcaaatgccttgaatgtgaatagcttg
cggatgctattgcacaagtcatcctcccctcaaagctctagtgcatttcagcgatctcag
agtacagatttcgagaatttgcggtcggctaggtctttggtacggaaagtaatagaggat
agtttgctgaagttgcaagaagaaccctccaaacataccagatctataagatgggagcta
ggagcatgttgggtgcaacatttgcaaaatcaggcttctgggaaaaatgaatccaagaaa
actgaagaacctaagcttgagcctgctgtcaagggtcttggaaagcaaggtgcactgctg
aaggatataaagaagaaaacagatggcagaatcaacaaaactgagcagggaaagcaggtt
cctgcagataacaaccttgacatgaataagaaatctgatgctactgatcagaaggaattg
gagaaacgagatgaggaaatggaagaattgtggaaaaagctgatttctgaatcagcttat
ttgcgccttaaagaatcagaaactggtcttcaccttaagtcacctgatgagttgattgaa
atggcgcataaatactatgctgatactgcacttccaaaactggtagcagattttggctcc
ctagaactttcaccagttgatggaagaacattgacagattttatgcataccagaggtttg
caaatgtgctccttgggacgcgtggttgaactggcagacaagctacctcatgttcaatcg
ctatgtgtacatgagatggttgttcgagcttataaacacatattgcaagctgttgtagca
gcagttgacaacgttgctgacttggctgcatcaatagcagcatgtttgaacatattgtta
ggaacaccatctgcaaatgccgatgaagatatcactaatgaagatatgttaaaatggaaa
tgggtggagactttccttttaagaagatttggatggcggtggaatcatgaaagctgcccg
gacctgagaaaattttccattcttcgtgggttatctcataaggttgggcttgagcttgtt
cctagggactatgatatggactctgaatctccttttagaaaatcggatatcataagcatt
gttcctgtctataagcatgttgcatgttcatctgcagatgggcgaacactacttgaatca
tcgaagacttctttggacaaaggaaaattggaggatgctgttaattatggctctaaggca
ctttcgaagcttatgtcagtttgtggtccttaccatcgaatgacagctggagcatatagt
ctcctggctgtagtgctctaccatacaggggattttaatcaggcaaccatttaccagcaa
aaagcactggatataaatgagagagaacttggacttgatcatccagatacaatgaagagt
tatggagacctagctgtcttttactatcgacttcaacatacagagttagccttgaagtat
gtcaatcgcgcattgtatctcttgcatttaacatgcggtccttctcatccaaatacggca
gccacctacattaacgtagcaatgatggaagaaggtttggggaatgtccatgttgctctt
aggtacctacacgaagctctgaagtgtaaccaaagactacttggagctgatcatatacag
actgctgccagctaccatgccatagcaattgctctctctttgatggaggcatactcctta
agtgttcagcatgaacaaactaccctgcaaatactgcaggccaaacttgggtctgaggat
ctgcggacacaggatgctgctgcatggctcgagtactttgaatctaaggctttggagcag
caagaagctgcacgcaatggtaccccaaagccagatgcctcaatatccagcaaaggtcat
ttaagtgtttcagaccttttggattacatagcaccagacacagactctaaagcaagagat
gcccaaaggaaagctcgtgcaaagctcaaaggcaaacctggccaaacttgcgaaactgtc
tcggacgaatatcagaaggacgaaattgtgtcaccaacttctcctgtagtggagaactca
agtgataaagagaataaatctgaggttcatttgttggaacctaagattgaaaaatctgat
tcaggtctcccagatcaatcgataatgattaaaaatgatgaccttgaacaagaggagaat
tcagatgaaggatggcaggaagctgttcccaagggtcgctcacttacagctcgcagatct
tctggttcaaggaggccaagcctagcaaaactagatactaactttacaaatgtatctcag
tcatcaagatatcgaggaaagcccattaatttcacatccccaaaaccgattccaagtgaa
tctgctgccacatctggatctaatcttcctgttcccaaaaagtttgttaaaagttcaagc
ttcagtcctaagttacaagctgcaagcatttccactgcaggagcagataaatcatcccca
gctagcccagcttccaccgatctacttgccaagtctgctcctgctgcaagttcaatgggt
gttcaagcagctgggaaacttttctcctacaaagaagttgctttggctcctcccggaaca
attgtgaaggccgtggctgaacagtttccaaaagggaatcctgccatagaatcaagttct
caggtgaatcaggaggcagcaatgtcggtggtcaccccaggtgatgtgacagctgtgaag
cccgcagaagaaaaccaactcgtggtttctgagggagaaacaaagtactctgtcaaggaa
gaagaaaagacagaagtcagggactcaggtgaaaccttgcagacaaaaagggattctgca
ttagtggatacagcagcaaaggctggaaaagaagtaataggcgctgcagttggaaccaca
aatacagaagctggaaatgtagaagttctaggatttgaaaattcagatcctttgaagaat
tcaaacgttaatccttctaaaatcgatggcttggagtcaggatcactgcagagatgcata
gaggcttcccctgatctggaacctcagaccattttaaccgagaaatcaactttgttacca
gaacaggatgcttcttttcctaaagggaaagtaacagaaagtccgcaagaactaccaaat
gatgacatcggtgtcaatccattgccagctcaagtagaaaagcgcgatgaagtagaaacg
gtaaaggagacaacaacaaaactttctgctgctgcaccgccatttaacccatccacagtt
ccagtttttggttctattgttgttcctgctttcaaagatcatggaggtattcttcctcca
ccagtgaatatacctccaatgcttaaggttaatcctgtccgtagatcacctcatcagtct
gctacagctcgagttccttacggtccaagactgtctggtggctataacagatctggaaat
agggtcccacgtaaacaacttagttttcctaatgctgaacatactgcagaagtaaatcac
ttcagccctccaagaattatgaacccacatgcagctgagtttgtaccaagccaaccttgg
attcctaatggctatccggtttctccaaatggcatgccagtgtctccaaacagtttcgct
gtatccccaaatggtgttccagttatgcctaatgggtttatgaatggtatgccactgact
caaaatgggattcctgctcctattgattcagtagattctgctggtgttataattgttgat
gttggagctgaaatcaaccctgatgatgagaagtcctcggtggaaagtaaggttgagact
cagccaactgagcaaaaacctactgaagattcatacgtgcacaatgagagcaataatcct
gtagttgaagagaaaccaacggatgtagccccagtgaccagcggcgcagttttggcaaag
gatattttcaatgataaaccagttgaagaaaaaataagcaagtgttggggagattacagc
gacagtgaagctgaaatagttgaggttacaagttga

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