KEGG   Citrus sinensis (Valencia orange): 102624015
Entry
102624015         CDS       T02983                                 
Name
(RefSeq) actin-interacting protein 1-1
  KO
K24736  WD repeat-containing protein 1 (actin-interacting protein 1)
Organism
cit  Citrus sinensis (Valencia orange)
Brite
KEGG Orthology (KO) [BR:cit00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04990 Domain-containing proteins not elsewhere classified [BR:cit04990]
    102624015
Domain-containing proteins not elsewhere classified [BR:cit04990]
 Other domain-containing proteins
  WD40 repeat (WDR) domain-containing proteins
   102624015
SSDB
Motif
Pfam: WD40 WD40_WDHD1_1st WD40_Prp19 Beta-prop_EML_2 Beta-prop_EML WD40_CDC20-Fz Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 EIF3I WDR55 WD40_MABP1-WDR62_2nd Beta-prop_IFT122_1st Beta-prop_WDR90_POC16_2nd ANAPC4_WD40 Beta-prop_WDR35_TULP_N WDR90_beta-prop_4th Beta-prop_RIG_2nd Beta-prop_IFT140_1st WD40_MABP1-WDR62_1st Beta-prop_WDR19_1st NBCH_WD40 Beta-prop_Vps41 Beta-prop_SPT8 eIF2A Beta-prop_HPS5 Beta-prop_NUP159_NUP214 Beta-prop_DCAF12 KNTC1_N
Other DBs
NCBI-GeneID: 102624015
NCBI-ProteinID: XP_052291267
LinkDB
Position
2:join(24763808..24764205,24764620..24764781,24765008..24765194,24765384..24765809,24766144..24766551,24766746..24767003)
AA seq 612 aa
MAEVHLSETYACAPSTERGRGILISGNPKTDTILYCNGRSVLIRYLDKPLHVEFYGEHGY
PVTVARYSPNGEWIASADVSGSVRIWGTHNGFVLKNEFKVLSGRIDDLQWSPDGLRIVAC
GDGKGKSFVRAFMWDSGTTVGDFDGHSRRVLSCEFKPTRPFRIATCGEDFLVNFYEGPPF
KFKLSHREHSNFVNCIRFSPDGSKLISVSSDRKGLIYDGKSGEKIGELSSEDGHHGSIYA
VSWSPDGKKVLTVSADKSAKVWEILEDGSGGRVIKTFASSTSNAVEDMLVGCLWQNDHLI
TVSLGGIISIFSASNLDKAPLSFSGHVKNVSTLTALKNSQQTILSSSYDGVIIKWIRGVG
YSSKLEKKYDAKIKCLAAVEEVIFTAGFDNKVWRVPLCEGECGDAEHIDVGSQPLDLSLA
LSSPELALVSTESGVILLDSLKVMSKIDLGFTVTACAIAPDGSEAIVGGQNGKLHIYSIS
GNTLTEEMVLEKHRGAITVIQYSPDVSMFASADGNREAIVWDRVSKEVKLNNMLFHTARI
NCLAWSPSSTMVATGSIDTCVIIYEIGKPASSRITIKNAHLGGVYGVAFMDDFNVVSSGE
DACIRVWRLATE
NT seq 1839 nt   +upstreamnt  +downstreamnt
atggccgaagtacatctctcagaaacctacgcatgcgcgccatccaccgagcgcggccgc
ggaattctgatctccggcaatccgaaaacagacaccattctctactgcaacgggcggtcc
gttttgatccgctacttggacaagccgctccacgtggagttctacggggagcacgggtac
ccggtcaccgtggcccgttactcgcccaatggcgagtggatcgcgtctgctgacgtgtcg
gggtccgttaggatttgggggacccacaatggattcgtgcttaagaatgagtttaaggtt
ttgtcgggtcggatcgatgatttacagtggtcacctgatgggctgaggattgttgcgtgt
ggtgatggcaagggaaagtcgttcgttcgcgcctttatgtgggattcaggcactacggtg
ggggattttgatggccactccaggcgtgtcctgagctgtgaatttaaaccaacaaggcca
tttcgtatcgccacatgtggggaggatttcttggtgaatttttatgaaggtccaccattt
aagttcaagctgtctcacagggagcactcaaactttgtcaactgtattagattctcacca
gatggaagcaaattaattagtgtaagctcagataggaagggtttaatatacgatgggaag
agtggggaaaagattggagagttgtcctcagaagatggtcaccatggcagtatatatgca
gttagttggagtcctgatggtaaaaaggttctcactgtgtctgctgacaagtctgccaaa
gtttgggagattcttgaagatggtagtgggggaagggtaattaaaacatttgccagttcc
acatccaatgcagtggaggacatgcttgttggatgcctttggcagaatgatcatctcatc
actgtttcccttggtgggataattagcattttttccgcaagcaatcttgataaagctcct
ctatcattttctggacacgtgaagaatgtcagtacattaactgctcttaaaaacagccaa
cagacaatcctgtccagcagctatgacggtgtcatcattaaatggatccgaggtgttggg
tacagtagtaaattagagaagaaatatgatgctaagattaaatgtttagcagcagttgaa
gaagtgatttttacagctgggtttgataacaaggtatggagagttcccctgtgcgaaggg
gaatgtggagatgcagagcatattgatgttggtagtcagcctttggacctgagccttgcc
cttagttcccctgaactggctttggtttcaactgaatctggagttatcctgcttgatagt
ttgaaagtgatgtcaaagattgatcttgggtttactgtaacagcatgtgcaattgcacct
gatggaagtgaagccattgtgggtggtcagaatgggaagttgcacatatattccatctca
ggaaatactcttacagaagaaatggttcttgagaagcatagaggtgcaattactgtgata
caatattcaccagatgtatccatgtttgcttcagctgatggcaatcgtgaagccattgtt
tgggaccgtgtgtccaaagaggtgaagcttaataacatgttgtttcacactgctcgcatc
aattgcctagcttggtctcccagtagcactatggtggctactggttcgattgacacttgt
gtcatcatttatgaaattgggaaacctgcttcgagtcgcataacgataaagaatgctcat
ttgggtggagtctatggcgtggcttttatggatgactttaacgtggtgagttcaggagag
gatgcttgtatacgtgtgtggagattagcaacggaataa

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