KEGG   Citrus sinensis (Valencia orange): 102624221
Entry
102624221         CDS       T02983                                 
Name
(RefSeq) DNA repair endonuclease UVH1 isoform X1
  KO
K10848  DNA excision repair protein ERCC-4 [EC:3.1.-.-]
Organism
cit  Citrus sinensis (Valencia orange)
Pathway
cit03420  Nucleotide excision repair
cit03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:cit00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    102624221
   03460 Fanconi anemia pathway
    102624221
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:cit03032]
    102624221
   03400 DNA repair and recombination proteins [BR:cit03400]
    102624221
DNA replication proteins [BR:cit03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Other termination factors
    102624221
DNA repair and recombination proteins [BR:cit03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     102624221
SSDB
Motif
Pfam: ERCC4
Other DBs
NCBI-GeneID: 102624221
NCBI-ProteinID: XP_006477073
LinkDB
Position
3:join(4755153..4756012,4756184..4756407,4756574..4756653,4757038..4757202,4757598..4758410,4758751..4758861,4758949..4759209,4759330..4759553,4759837..4760047)
AA seq 982 aa
MVLEFHQHIIAELLQEPNGGLVILSSGLSLPKLIASVLLLHSPSQGTLLLLSSSPNLKSQ
IIHYLTPNAPLLPSEITADLPANHRHTLYSSGQIFFVTPRILIVDLLTQRLPTSNLAGLI
ILNTHALTENSTETFICRIIKSLNREAYIRAFSDKPTAMVSGFAKTERIMKSLFIRKLHL
WPRFQVNVSEELEREPPVVVDVRVPMSKYMGGIQKAILEVMDACLKEMRKTNKVDVEDLT
VENGLFKSFDEILRRQLDPIWHILGKKTKQLVSDLKTLRKLLDYLVRYDAVTYLKYLDTL
RVSESFRSVWIFAESSYKIFDYAKKRVYRFTRSDGVELNGQSKSVTGKKRKLKKVDNNED
EDGGTSSTSTKVVLEEVLEEAPKWKVLREVLEEIEEERLKQALSREEVLLDGEENDHGIV
LVACKDECSCMQLEDCIRNGSEKVMREEWEKYLLSKVQLRGVQTSSKKKKSKEPKGYGIL
DGVAPVKIAQNAEASSVSKQEHDALLAAASKIRNQGKSDDGDNPETYYGSKGPGRGRGKG
RNRNGPACVPQSANKDSKSNSKAAIEDKPEISGSGNEGPADEIHSGVVGYSGGMLETAFV
EKEVQWKRSLKTDTAESKDSKPVPPVHFYALESDQPILDILKPFVIVVYHPDMSFVRQIE
VYKAENPSIKLKVYFLFYEDSTEVQKFEASIRRENGAFESLIRQKSFMMIPIDQDGHCLG
LNSSTEAQATTSQNAITRKAGGRKEVEKEMQVIVDMREFMSSLPNVLHQRGMRIIPVVLE
VGDYILSPLMCVERKSIQDLFTSFTSGRLYHQVETMVRYYRIPVLLIEFSQDKSFSFQSA
SDIGDDVTPNNIISKLSLLVLHFPRLRIIWSRSLHATAEIFAALKANQDEPDEAKAIRVG
VPSEDGIVENDVRAENYNTSAVEFLRRLPGVTDSNYRSIMDGCKSLADLVLLPVERLAEL
MGGQKAAQTLRDFLDAKYPTLL
NT seq 2949 nt   +upstreamnt  +downstreamnt
atggtgctcgaatttcaccaacacataatcgcagagcttctccaagagcccaatggcggt
ctcgtaatcctctcctcaggcctctccctcccgaagctaatcgcctctgttctcctcctc
cattccccttcacagggcactctcctcctcctctcatcctctcctaacctcaaatcccaa
atcatccactaccttactcctaatgctcctctcttaccctccgaaatcaccgccgatctt
cccgcgaaccaccgccacacgctttattcatccggtcaaatctttttcgtcacccccaga
atccttatcgttgacttattgacccagagactccccacttccaatctcgctggtttaatc
attctcaatacccacgcgctgacggagaactccactgagacttttatttgcaggattatt
aagagcttgaatcgggaagcgtatattagggccttttctgataaacccacagcgatggtt
tctgggtttgccaagacggagcggattatgaagagtttgtttattaggaagcttcatttg
tggccgaggtttcaggtgaatgtgtcggaggaactggagagggaaccaccggtggtggtg
gatgtgagggttccgatgagtaaatacatgggagggattcaaaaggcgattctggaagtg
atggatgcttgtttgaaggagatgaggaagactaataaggtcgatgtggaggatctgaca
gtggagaatggcctgtttaagtcgtttgatgagattctgcggagacagttggatcccatt
tggcatatcttggggaagaagactaaacagttggtttctgatttgaagactttaaggaag
ttgttggattatcttgtcaggtatgatgcggtgacctatttgaagtatttggatacactg
agagtgtcagagagctttcgctctgtttggatatttgcagagtccagttataaaatattt
gactatgcgaagaagcgggtttatcgcttcacaaggtcagatggtgtggaattgaatggg
caaagcaagagcgtaacaggcaaaaagagaaaattgaagaaagttgataataatgaagat
gaagatggtggtacttcatctacaagtacaaaggtagttctggaagaagtattggaggag
gcaccaaagtggaaggtgttacgtgaggtccttgaagagatagaagaggaaagactaaag
caggctttatcaagggaagaagttctccttgatggggaagaaaatgatcatggtattgtc
ctggtggcttgcaaagatgagtgctcgtgtatgcagcttgaagattgcatcaggaatggc
tcagaaaaggtcatgcgggaagaatgggagaaatacttgttgagtaaagtacagctgcgt
ggtgtgcaaacctcatcaaagaaaaagaaatctaaggagccgaaaggttatggaattctt
gatggagttgctcctgtaaaaatagcacagaatgcagaagctagtagtgtcagcaaacag
gaacatgatgcactgttggctgcagcatcgaaaataaggaaccaaggtaaaagtgatgat
ggtgataatcctgagacttattatggaagcaaaggacctggtagaggacgtggaaaagga
aggaatagaaatggcccagcatgtgttccacaatctgcaaataaagatagtaagagtaac
agcaaagcagcgatagaagataaacccgaaatatctggttcaggaaatgaaggcccagca
gatgaaattcactccggtgtagtaggttattctggaggcatgcttgaaactgcatttgtt
gagaaagaggttcagtggaaacgcagtctaaagactgatactgcagagtccaaagattcc
aagccagtgccacctgtacacttttatgcgctagaaagtgaccagcccatacttgatatt
ctgaaaccctttgtgattgttgtttaccatccagacatgagttttgttagacaaattgaa
gtctacaaagctgagaatccttcaataaaattgaaagtttattttctcttttacgaagat
tccacagaggtgcaaaagtttgaggctagtatacggagggagaatggagcttttgagtca
ttgatcaggcagaaatcatttatgatgatcccaatcgatcaggatgggcactgtctggga
ttgaattcttctacagaggcacaggccaccacttcccagaatgcaataactcgaaaggca
ggtggaagaaaggaagttgagaaagaaatgcaggtcatagtggacatgagggagttcatg
agtagcctccctaatgttctccatcagaggggcatgcgcattataccagtggttttggaa
gttggtgattatattctgtcaccattaatgtgtgttgagagaaagagtatccaagatcta
tttacaagcttcacgtctggccgcctttatcaccaagtggaaacaatggtccgctattac
agaatacctgttcttctgattgagttttcacaagacaaaagcttttcatttcagtctgca
agtgatattggtgatgatgtgacaccaaataatattatatccaagttgtcgctgcttgtt
ctacattttcctcgcttgagaatcatctggtctcgcagtttgcatgcaactgctgaaata
tttgctgcactgaaagcaaatcaagatgaacctgacgaggcaaaggcaattagagttggt
gtcccctccgaagatggtatagtggaaaatgatgtgagagccgaaaattacaatacatct
gctgtggagttcctaaggcgactccctggtgtgacagattcaaactacaggtctataatg
gatggatgtaagagcttggctgacctggtcctcctaccagtagaaaggctagctgaacta
atgggtggtcagaaagctgcgcagactctcagagattttcttgatgccaagtatccaaca
ttactatag

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