Citrus sinensis (Valencia orange): 102624239
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Entry
102624239 CDS
T02983
Name
(RefSeq) protein mago nashi homolog
KO
K12877
protein mago nashi
Organism
cit
Citrus sinensis (Valencia orange)
Pathway
cit03013
Nucleocytoplasmic transport
cit03015
mRNA surveillance pathway
cit03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cit00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
102624239
09122 Translation
03013 Nucleocytoplasmic transport
102624239
03015 mRNA surveillance pathway
102624239
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cit03019
]
102624239
03041 Spliceosome [BR:
cit03041
]
102624239
Messenger RNA biogenesis [BR:
cit03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
102624239
Spliceosome [BR:
cit03041
]
Complex C
Other components
EJC/TREX
102624239
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mago_nashi
Motif
Other DBs
NCBI-GeneID:
102624239
NCBI-ProteinID:
XP_006464412
UniProt:
A0A067H0V3
LinkDB
All DBs
Position
3:join(51891292..51891507,51892122..51892298,51893602..51893661)
Genome browser
AA seq
150 aa
AA seq
DB search
MAGEEDGEFYLRYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDTMIRKEVFLTPAV
LRECRRIISESEIMKEDDNNWPEPDRVGRQELEIVMGNEHISFTTSKIGSLVDVQSSKDP
EGLRIFYYLVQDLKCFVFSLISLHFKIKPI
NT seq
453 nt
NT seq
+upstream
nt +downstream
nt
atggccggagaagaagatggagagttttatcttcgttactacgtagggcacaagggcaaa
ttcggtcacgagttcttggagttcgagtttcggccagatggcaagctccgatacgctaat
aattccaactacaaaaacgatactatgattcgcaaagaggtcttcctcacccccgccgtc
ctccgcgaatgccgccgcatcatttccgagagcgagatcatgaaggaagatgataacaac
tggccggagcctgaccgtgttggacggcaggagctggagattgtaatgggaaatgaacat
atctccttcactacttcaaaaattggatcacttgttgacgtccagagtagtaaggatccg
gaaggccttcgtatattctattatcttgttcaggacttgaagtgctttgtgttctctctc
atctcacttcatttcaagatcaaacctatataa
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