Citrus sinensis (Valencia orange): 102624271
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Entry
102624271 CDS
T02983
Name
(RefSeq) UV-stimulated scaffold protein A homolog
KO
K23720
UV-stimulated scaffold protein A
Organism
cit
Citrus sinensis (Valencia orange)
Pathway
cit03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
cit00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
102624271
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cit03400
]
102624271
DNA repair and recombination proteins [BR:
cit03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
Other TCR factor
102624271
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UVSSA_N
DUF2043
VHS
DUF7992
Motif
Other DBs
NCBI-GeneID:
102624271
NCBI-ProteinID:
XP_006491284
UniProt:
A0A067HF35
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Position
3:join(48014770..48014946,48015223..48017013)
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AA seq
655 aa
AA seq
DB search
MEEQGGKVRALIDKATNSTEREVDPRLLKAIKWVVRNSDSELRLAAQTLMDLMKRDHSQV
RYLTLLIIDELFMRSKLFRTILVENMDQLLSLSIGFRRNLPLPAPPAIASILRSKAFEFL
EKWNASFGVHYRQIRLGFDYLKNTLRLQFPNLQANAARIQRERREREMRTKEILRNKFEM
LRQNLSSIKEEIQSTIDEIGECLDIIRAKEEIMLLDPLDDEDFEEFHSSELRQIRLDSLK
EGEKVHEDEDNKVVFDALRELYKLLVTKHLVLVQEWISVLIRVEVSDNRSRDKMLKEFID
IQNRLQLVKKKCEDSGCGLINNVKPLIEDELEEDFWEEGKIGSSESGSSNASSKHNSNLS
MVLASSEVIGKASEVPKQKSDGNDSLDNEGSKIDSTLLRSKLLAEAPVIVCGSFSDNLKR
DVLVNQRGMEFDNHWGRVDYDAVIPAEKIAELNLRATLYKEEQVEIQPCRAPLRKGGLCQ
RRDLEVCPFHGPIIPRDDEGNPINQSTSSIEKSSLTDETLTDLGSDLVEQLAKHAIKNVR
ERDKEEARKRKIDKQLLNRAKLAKVREHNEAVLRDAALASTSRSATAGDEAEDTNGRRSS
SRNKKQTLASMLRKKVTPRDRLTRRLLNTRARDATIRRLRMGEDAIYRESFPNQW
NT seq
1968 nt
NT seq
+upstream
nt +downstream
nt
atggaagagcaaggagggaaggtgagggccttgatagacaaggcgacgaactcgacggaa
cgagaggtggacccacgtctcctcaaggccattaaatgggtagttcgaaattcggattcg
gagctgcgactcgccgctcaaaccctcatggaccttatgaaacgcgaccattctcaggtc
cgatatctcacacttctcataattgatgaactcttcatgcgatcaaagctttttaggacc
attcttgttgagaacatggatcagttattgagtttaagtattggattcagaagaaattta
ccacttcctgcgcctccagctattgcatctattttgcgatcaaaggcttttgaatttttg
gagaaatggaatgcttcttttggggttcactacagacaaattagattaggctttgattac
cttaaaaatactctcaggctccagtttcctaatttacaagcaaatgcagctcggattcag
cgggagagacgggaaagagagatgaggacaaaagagattttacgaaacaagtttgaaatg
ctgcggcaaaatctttcttcgataaaggaagaaatacagtcgacaatagatgagattgga
gagtgtttagacatcattcgtgccaaggaagaaattatgctgcttgatcccttggatgat
gaagattttgaggagttccattcttctgaattgaggcagattcgccttgattcattgaaa
gaaggggaaaaggttcacgaggatgaagataataaagtagtttttgatgcactgagggag
ttgtacaagcttctagtgacaaagcatttggttttggtccaagaatggatttctgttctt
attagggtggaagtgtcagacaataggtctagagataaaatgctgaaggagttcattgat
attcaaaatcgcctccaattggtgaagaagaaatgtgaagactctggctgtggtcttata
aacaatgtgaaacctctcatagaagatgaattagaggaagatttttgggaagagggtaag
attgggtctagtgagagtgggagttcgaatgcatctagtaagcacaatagtaatctgtcc
atggtattggcctccagtgaggtcataggtaaggcttctgaagtccccaaacagaagtct
gatgggaatgattctctggataatgaaggtagtaaaattgattcaacattgctcagaagt
aagcttctggcagaagctccagtgattgtatgtggttctttctcagataatttgaaaagg
gatgttttggttaatcaaaggggcatggagtttgacaatcactggggtagggtagactat
gatgcagttattccagcggagaagatagcagaattgaaccttagggcaactctttacaaa
gaagagcaagtagaaatccaaccatgccgtgctcctttgaggaaaggaggcctttgtcag
agaagggatttagaagtctgcccatttcatggacccatcattccccgagatgacgaagga
aatcctatcaatcagagcacatcatcgatagaaaagagctctttaacggatgagacttta
acagatttggggtctgatttagtggagcaattagcaaaacacgctataaagaatgtaagg
gagagagataaagaggaagctaggaagaggaaaattgataaacagttgctgaatcgagca
aaacttgcaaaagtacgggaacacaatgaagcagttttacgggatgctgccttggcttca
acttcaaggtctgcaactgcaggagacgaggcagaagatacaaatgggaggagatcgtca
tcaagaaacaagaagcaaactctagcttccatgctgcgaaagaaagtaactccaagagat
aggttaactcgcagacttctgaatacccgagcaagggatgcaacaataagacggctgaga
atgggtgaggatgcaatttacagagagtcctttccaaatcagtggtaa
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