Citrus sinensis (Valencia orange): 102624328
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Entry
102624328 CDS
T02983
Name
(RefSeq) vesicle transport V-SNARE 13
KO
K08493
vesicle transport through interaction with t-SNAREs 1
Organism
cit
Citrus sinensis (Valencia orange)
Pathway
cit04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
cit00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
102624328
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cit04131
]
102624328
Membrane trafficking [BR:
cit04131
]
SNARE
SNAP-25[N] (Qb)
Vti1
102624328
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
V-SNARE
V-SNARE_C
Sec20
RIFIN
KIAA1549
Prominin
DUF3792
DUF5930
ETRAMP
Pox_EPC_I2-L1
Cauli_AT
Motif
Other DBs
NCBI-GeneID:
102624328
NCBI-ProteinID:
XP_006482638
LinkDB
All DBs
Position
6:complement(join(25696090..25696242,25696343..25696513,25697042..25697230,25697625..25697683,25697789..25697882))
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AA seq
221 aa
AA seq
DB search
MSDVFERYERQYCEISANLSKKCTAAASLDGERKKQKVSEIQTGLDEAESLIRKMDLEAR
SLQPNVKAVLLAKLREYKSDLNNLKSEVKRLVSGNLNAAARDELLESGMADALTASADQR
SRLMMSTERVNQSTDRIKDSRRTMLETEELGVSILQDLSSQRQSLLHAHNTLHGVDDNVG
KSKKVLTAMSRRMSRNKWIIGTVVAVLVIAIILILYFKLAK
NT seq
666 nt
NT seq
+upstream
nt +downstream
nt
atgagtgacgtatttgaaaggtacgagcgacaatactgtgagatttcagcgaatctctca
aaaaagtgtacggcagctgcgtctcttgatggagaaaggaagaagcaaaaagtatctgaa
attcaaactggattggatgaggctgaatctttgatacggaaaatggaccttgaggcaaga
agtttgcagccaaatgttaaggctgtacttctagctaagttaagggagtataaatcagat
ttaaacaatctgaaaagtgaagttaaaagacttgtttctggaaatttgaatgccgctgct
cgagatgagttattggaatcaggaatggccgacgctttgacggcatcagctgatcaaagg
tcaaggttaatgatgtcaacggaaagggtaaatcagtccactgatagaattaaagatagt
agaagaaccatgctggaaacagaagagcttggtgtttcaattcttcaagatctgagttca
caaagacaatctcttttgcatgctcataatacacttcatggagtggatgataacgttggc
aagagtaagaaagttttaacggccatgtcaagaaggatgagcaggaacaagtggattatt
ggtaccgttgttgcagttctcgttattgcaatcatcttgattttgtacttcaaacttgct
aaatag
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