Citrus sinensis (Valencia orange): 102624329
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Entry
102624329 CDS
T02983
Name
(RefSeq) uncharacterized protein LOC102624329 isoform X1
KO
K13146
integrator complex subunit 9
Organism
cit
Citrus sinensis (Valencia orange)
Brite
KEGG Orthology (KO) [BR:
cit00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cit03041
]
102624329
Spliceosome [BR:
cit03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
Integrator complex
102624329
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-Casp
Lactamase_B_6
Beta_lactamase3
Motif
Other DBs
NCBI-GeneID:
102624329
NCBI-ProteinID:
XP_006482992
LinkDB
All DBs
Position
4:complement(join(28682592..28683110,28683227..28683278,28683479..28683564,28683703..28683820,28684004..28684095,28684191..28684283,28684496..28684706,28684866..28685159,28685415..28685629,28685741..28686094,28686213..28686221))
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AA seq
680 aa
AA seq
DB search
MKFTCLCQGGGFNFPPCHILNVSGFQVLFDCPLDLSALTVFSPLPNDFYKAICEENSDSQ
NRQKVEKPLDANDLIFAEPWYKTVNNLHLWNVSFIDVVLISSPMGMLGLPFLTRMEGFSA
KIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEELELLPSALRKIALGE
DGSELGGWMPLYSAAHVTDCISKVQTLRFGEEACYNGILIIKAFSSGLDMGACNWIISGA
KGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDIDQSSFSDDNNNWEEL
INSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSSL
KIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVKLIKEKKIHVFPAVHSP
KLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDHNSLLVLENEVDAELAVLPFKPISMK
VLQCSFLSGKKLQKVQPLLKILQPKLVLFPEELRTHVSFSDVTSFSVSHYSENETIHIPS
LKESAELEIAADSASKFQWRMLKQKKLNITRLKGRLFVNHGKHQLLPENEPGGSSQTRPF
LHWGSPDPENLLAELSKMGINGSVERCMTDAESEDGFTVKVQDPEKSMIEVRAAVTVISA
ADKNLASPIVKAMENILEGI
NT seq
2043 nt
NT seq
+upstream
nt +downstream
nt
atgaagttcacatgcttgtgccaaggtgggggcttcaatttcccaccatgtcacatactc
aatgtgagtggatttcaggtcttatttgattgcccattggacctttcggcactcacagtc
ttttctccactgccaaatgatttttataaagctatatgcgaggaaaattctgattctcaa
aacaggcagaaggttgagaaaccccttgatgcaaatgatttgatatttgcagaaccatgg
tacaaaactgtgaataatttacacttgtggaatgtttcttttattgatgttgtgttgata
tcaagcccgatgggtatgcttggattgccctttctcactcgaatggagggcttttcagca
aagatatatataactgaagcagcagcaaggattgggcagcttatgatggaggagcttatt
tgtatgaatatggaatatagacagttctatggagctgaggagtcaagtggcccacaatgg
atgaagtgggaagagcttgaattgcttccatctgcattaaggaagatagctttaggtgaa
gatgggtcagagctgggggggtggatgcccttgtatagtgcagctcatgtgacggattgc
atctcgaaggttcaaacacttagatttggagaagaagcttgctacaacgggatattgatc
atcaaggcatttagctctggtttagacatgggtgcttgcaattggataatcagtggtgca
aaaggaaatatagcttacatttctggctccaattttgcttctggtcatgcaatggatttc
gattaccgtgctattcaaggtagtgatctaatattgtattcagacttgtcatctctggac
tcaacagaagatattgatcagtcaagtttcagtgatgataacaacaattgggaggaattg
atcaattccttaagcaattatgatgagagtgtggaggaaatggagaaactagcttttatt
tgctcctgtgcaatagattctgttaaagctggcggctcagtccttattcctattaatcgg
gttggagtctttctgcagctattggagcagatagcaatattcatggagtgttcaagtttg
aagattccaatatatattatctcttccgtagcagaagagttattggcatacaccaataca
ataccagagtggctatgcaagcagcggcaagagaagcttttttctggtgacccattgttt
gcccatgtcaagctcataaaagagaagaagatccatgtgtttcctgcagtccattcgcct
aaactattgatgaattggcaggaaccttgcatcgtgttttctccccactggagtttgcgg
cttggtcccaccattcatctgcttcgacgctggagtggggatcataactctttacttgtt
cttgagaacgaagtagatgctgaattggccgtcctgccatttaaaccaatatcaatgaag
gttcttcaatgttcttttttatctggaaaaaagcttcagaaagttcaacccttactaaag
atactgcaaccgaagttagttctgtttccagaggaattgaggactcatgtcagtttttca
gatgttacttcattctcagtctcccactattcagaaaatgaaacaatacatattccaagc
ttgaaggaaagtgcagagctagagattgcagctgacagtgcttccaaattccagtggagg
atgttgaaacagaaaaaattgaatatcactagattaaagggaaggctcttcgtcaatcat
gggaaacatcagttgctccctgaaaatgaaccagggggctcctcacagaccaggccattt
ctacattggggttcaccagatccagaaaatcttttggccgagttatccaagatgggtatt
aatggctctgttgaacgatgcatgactgatgctgaatcagaagacggtttcactgtaaaa
gtccaagatcctgaaaagtctatgattgaagtccgagcagcagtaactgttataagtgct
gctgataaaaatttagcctcccctattgtcaaagctatggaaaacatcttggaaggcatc
taa
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