KEGG   Citrus sinensis (Valencia orange): 102624350
Entry
102624350         CDS       T02983                                 
Name
(RefSeq) clathrin heavy chain 1
  KO
K04646  clathrin heavy chain
Organism
cit  Citrus sinensis (Valencia orange)
Pathway
cit04142  Lysosome
cit04144  Endocytosis
cit05100  Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:cit00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    102624350
   04142 Lysosome
    102624350
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05100 Bacterial invasion of epithelial cells
    102624350
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:cit04131]
    102624350
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:cit04147]
    102624350
Membrane trafficking [BR:cit04131]
 Endocytosis
  Clathrin-mediated endocytosis
   Clathrin
    102624350
Exosome [BR:cit04147]
 Exosomal proteins
  Proteins found in most exosomes
   102624350
SSDB
Motif
Pfam: Clathrin Clathrin_propel Clathrin_H_link Clathrin-link TPR_COPA_B
Other DBs
NCBI-GeneID: 102624350
NCBI-ProteinID: XP_006486297
LinkDB
Position
4:join(1330030..1330074,1330391..1330595,1331533..1331621,1331718..1331796,1331935..1332062,1332610..1332708,1332810..1332998,1333077..1333304,1333394..1333459,1333563..1333679,1333817..1334014,1334673..1334789,1334901..1334960,1335301..1335387,1335572..1335655,1335755..1335889,1335974..1336036,1336119..1336223,1336305..1336417,1336503..1336755,1336851..1336987,1337062..1337340,1337427..1338429,1338701..1339186,1339286..1339456,1339542..1339727,1339824..1339946,1340430..1340540,1340855..1341004)
AA seq 1701 aa
MAAANAPISMKEVLTLPSVGINPQFITFTNVTMESDKYICVRETAPQNSVVIIDMNQPMQ
PLRRPITADSALMNPNSRILALKAQLPGTTQDHLQIFNIELKAKIKSHQMSEQVVFWKWI
SPKMLGVVTQTSVYHWSIEGDSEPVKMFDRTANLTNNQIINYKCDPTEKWLVLIGIAPGS
AERPQLVKGNMQLFSVDQQRSQALEAHAASFAQFKVPGNENPSVLISFATKSFNAGQVTS
KLHVIELGAQPGKPSFTKKQADLFFPPDFADDFPVAMQISHKYGLIYVITKLGLLFVYDL
ETAAAVYRNRISPDPIFLTSEASSLGGFYAINRRGQVLLATVNEATIVPFVSGQLNNLEL
AVNLAKRGNLPGAENLVVQRFQELFAQTKYKEAAELAAESPQGLLRTPDTVAKFQSVPVQ
AGQTPPLLQYFGTLLTRGKLNAFESLELSRLVVNQNKKNLLENWLAEDKLECSEELGDLV
KTVDNDLALKIYIKARATPKVVAAFAERREFDKILIYSKQVGYTPDYLFLLQTILRTDPQ
GAVNFALMMSQMEGGCPVDYNTITDLFLQRNLIREATAFLLDVLKPNLPEHGFLQTKVLE
INLVTFPNVADAILANGMFSHYDRPRIAQLCEKAGLYMRALQHYTELPDIKRVIVNTHAI
EPQSLVEFFGTLSREWALECMKDLLLVNLRGNLQIIVQTAKEYCEQLGVEACIKLFEQFK
SYEGLYFFLGSYLSSSEDPDIHFKYIEAAAKTGQIKEVERVTRESNFYDPEKTKNFLMEA
KLPDARPLINVCDRFGFVPDLTHYLYTNNMLRYIEGYVQKVNPGNAPLVVGQLLDDECPE
DFIKGLILSVRSLLPVEPLVEECEKRNRLRLLTQFLEHLVSEGSQDVHVHNALGKIIIDS
NNNPEHFLTTNPYYDSRVVGKYCEKRDPTLAVVAYRRGQCDDELINVTNKNSLFKLQARY
VVERMDADLWEKVLTPENEYRRQLIDQVVSTALPESKSPEQVSAAVKAFMTADLPHELIE
LLEKIVLQNSAFSGNFNLQNLLILTAIKADPSRVMDYVNRLDNFDGPAVGEVAVEAQLYE
EAFAIFKKFNLNVQAVNVLLDNIRSIERAVEFAFRVEEDAVWSQVAKAQLREGLVSDAIE
SFIRADDATQFLDVIRAAEDADVYHDLVRYLLMVRQKVKEPKVDSELIYAYAKIDRLGDI
EEFILMPNVANLQNVGDRLYDDTLYEAAKIIYAFISNWAKLAVTLVKLKQFQGAVDAARK
ANSAKTWKEVCFACVDAEEFRLAQICGLNIIVQVDDLEEVSEYYQNRGYFNELISLMESG
LGLERAHMGIFTELGVLYARYRYEKLMEHIKLFSTRLNIPKLIRACDEQQHWKELTYLYI
QYDEFDNAATTIMNHSPEAWDHMQFKDVAVKVANVELYYKAVHFYLQEHPDLINDLLNVL
ALRVDHTRVVDIMRKAGHLLLVKPYMVAVQSNNVSAVNEALNEIYVEEEDYERLRESIDM
HDNFDQIGLAQKIEKHELLEMRRVAAYIYKKAGRWKQSIALSKKDKVYKDAMETASQSGD
RELAEELLVYFIEQGKKECFASCLFVCYDLIRPDVALELSWMNNMIDFAFPYLLQFIREY
TGKVDELVKDKIEAQIEVKSKEKEEKDVIAQQNMYAQLLPLALPAPPMPGMGGGFASTAP
PMGGMGMPPMPPFGMPPMGSY
NT seq 5106 nt   +upstreamnt  +downstreamnt
atggctgctgccaacgcgccgatctccatgaaggaggtcttaaccttgccaagtgtcggg
attaatccgcaatttattactttcacgaatgttacgatggaatctgataagtacatatgt
gttcgagaaactgctccacagaatagtgttgtgattattgatatgaatcagccgatgcag
ccgttgaggcggcctatcacggctgactcagcacttatgaatcccaattcaagaattctt
gctttgaaagcacaactccctggaaccactcaggatcacttgcaaatatttaacattgag
ctgaaagcaaaaatcaaatcgcatcagatgtctgagcaggtggtcttttggaagtggatt
agcccaaagatgttgggagttgtcactcaaacttcagtgtatcattggtcaattgaaggt
gattctgaaccagtcaagatgtttgatagaactgctaatttgacaaataatcagataatt
aactacaaatgtgaccctactgaaaaatggttggttttgattggaattgctcctggttca
gctgagaggccacaattggttaaagggaacatgcaacttttttcagtggatcaacagcgt
agtcaagctcttgaagcccatgctgcatcatttgcccaattcaaggttcctgggaatgag
aatccttctgttcttatttcctttgcgacaaagtctttcaatgctgggcaggttacatca
aagctgcatgttatcgagcttggtgcgcagccaggaaagccatcttttacaaagaagcaa
gcagatcttttctttcctcctgattttgctgatgattttccagtggcaatgcagatatcg
cacaaatatggtttgatttatgttatcaccaagcttggattgctatttgtttacgatttg
gagacggctgcggcagtgtaccgaaacagaattagtccagatccaatatttttgacatct
gaagcttcttcgctgggaggtttttatgccatcaacaggcgaggccaggtgttactggca
acagttaatgaagcaacaatagtgccttttgttagtggccaattgaacaatcttgaacta
gcagtcaatctggccaaaagaggaaaccttcctggtgcagagaatctggttgtccagcgg
ttccaagaactgtttgctcagacaaagtataaagaggcagctgagcttgctgcagaatct
ccacaaggactcctccgcacaccagatacagttgccaaatttcagagtgttcctgtgcaa
gctgggcagactccacctttgttgcagtactttgggacacttttgacaaggggaaagctc
aatgcttttgagtcattggaattatctcgcctagttgtgaaccagaacaaaaagaatctt
ttggaaaactggctagcagaggacaagttggaatgtagtgaggaacttggagaccttgtg
aagactgtggataatgatcttgcactgaaaatatatattaaagctagggcaaccccaaaa
gttgttgcagcttttgcagagaggagggagtttgacaaaattttgatttactcaaagcag
gttgggtatacacctgattatttattccttctgcaaacaattctccgaacagatcctcag
ggagctgttaactttgcattaatgatgtcccaaatggagggaggttgtccggttgattac
aatacgattactgatctgtttcttcagaggaacttgatccgcgaagcaacagcctttctg
ttggatgttttaaagccaaatctaccagaacatggttttcttcagacaaaggtgctggag
atcaatctcgtaacttttccaaatgtagctgatgctattttggccaatggaatgttcagc
cactatgatcgtcctcgaattgcccaactttgtgaaaaagctggtctttatatgagagct
ctgcaacattacacagaattaccagatattaagcgtgtcattgtaaatacacatgcaatt
gagccacagtcgctggttgagttttttggtactctttcaagagaatgggctttggagtgc
atgaaggaccttttactcgttaacctaaggggcaaccttcagataattgtgcagactgcc
aaggaatactgcgagcagttgggcgttgaggcttgcattaaactttttgagcaattcaag
tcatatgaagggctgtactttttcctgggttcatacttgagttccagtgaggatcctgac
atacacttcaaatacatagaggcagctgctaaaaccggacaaataaaagaggtggaacga
gtgacaagagaatcaaatttttacgaccctgaaaagaccaagaactttttgatggaagcc
aagcttcctgatgccaggcctctgattaatgtctgtgaccgatttggttttgttccagat
ctcacacattacctctacacgaacaacatgcttcgctacattgaaggttatgttcagaag
gtgaacccagggaatgctcccttagttgtaggacagctgttagatgatgaatgccctgaa
gattttattaagggcctcattctttctgtccgttctttgcttccggttgagcccctggtt
gaagaatgtgagaagaggaatcggcttcgtttgctcactcagttcttggagcatcttgtt
agtgaaggaagccaagatgttcatgtccacaatgctctgggtaaaattattattgacagc
aataacaatccagagcacttccttaccactaatccttactatgattcccgagtggtgggt
aaatattgtgagaaacgtgatccaaccctggctgttgtggcttaccgtaggggacaatgt
gatgatgaactcatcaatgtcaccaataagaactcactgttcaaactacaagccagatat
gtggttgagagaatggatgcggatctatgggagaaggttcttacccctgaaaatgagtat
agaagacagctcattgatcaagttgtatctactgctttgccagaaagcaagagtccagaa
caagtttctgcagctgttaaagctttcatgactgctgatctgccccatgaactaattgaa
cttcttgaaaaaattgtgctgcaaaactctgccttcagtgggaacttcaacttgcaaaac
ctgcttatcttgacagctattaaggctgatccatctagagtcatggattatgttaataga
ctagataactttgatggacctgctgttggggaagtggctgttgaagctcaactatatgag
gaagcatttgctattttcaagaagttcaacttgaatgttcaggctgtcaatgtcttgttg
gataacatccgaagtattgaacgggctgtggagtttgcattccgtgttgaagaagatgca
gtttggagccaggtagcaaaggctcaactgagggaggggctggtgagcgatgcaattgag
tcatttatccgtgctgatgatgctactcaattcctggatgttattcgtgctgccgaggat
gcagatgtctaccatgacttagtgagataccttcttatggtcaggcaaaaggtaaaagag
ccgaaggtggatagtgagctcatttatgcatatgcaaagattgataggctgggtgatatt
gaggaatttattctcatgccgaatgttgctaatctccaaaatgttggtgatcgcttgtat
gatgacaccctctacgaggctgcaaaaataatatacgcatttatatctaactgggcaaag
ttggccgtcacacttgtgaagctgaaacagtttcaaggtgctgtcgatgcggcacggaaa
gccaacagtgcaaagacatggaaagaagtttgctttgcatgtgttgatgctgaggagttc
cgtttggctcagatatgtggtctcaacattattgtacaggtggatgacctggaagaagtc
agtgaatattaccagaacagaggatacttcaatgaattaatctctctcatggagagtggt
ttgggattagaacgtgcacatatgggtattttcaccgagttgggagttctttatgccaga
tatcgttatgagaagcttatggagcacatcaaattgttttccacccgccttaatatcccc
aagcttattcgtgcttgtgatgagcagcagcactggaaggaactcacctatttgtatatc
cagtatgatgagtttgataatgcagcaactaccattatgaaccattctcccgaagcatgg
gatcacatgcagttcaaagacgttgctgtcaaagttgctaatgttgagctatattataag
gccgttcacttctacttgcaagaacatcctgacctcatcaacgatctacttaatgtgctt
gcacttcgtgtggaccatacacgtgttgttgacattatgcgaaaggctggtcaccttctc
cttgtgaagccctacatggttgcagttcagagcaacaatgtttctgctgtgaacgaggct
ttgaatgagatttacgttgaggaggaggactacgagagattgcgtgaatctattgatatg
catgataactttgatcagattggccttgcacagaagattgagaaacatgagcttttggaa
atgagacgagtcgctgcatatatttacaaaaaggctggcagatggaagcaatctattgca
ctgtcaaagaaagacaaggtttacaaagatgcgatggagactgcctcacaatctggtgat
cgtgaacttgcagaggagttgctggtttatttcatagaacaggggaagaaggaatgcttt
gcgtcatgcctgttcgtttgttatgatttgatcagacctgatgttgctcttgaactttct
tggatgaacaacatgatcgactttgccttcccatatctcttgcagtttatccgtgaatac
acaggcaaagttgatgaacttgtgaaggacaaaattgaggctcaaattgaagtcaagtct
aaagagaaagaagaaaaggatgtaattgcacaacagaatatgtatgctcaattgctgcct
cttgctttgcctgcgccacctatgcctggtatgggaggtggttttgcttcaacagcacca
cctatgggtggaatgggaatgcctccgatgcctcctttcggcatgcctccaatgggtagc
tactga

DBGET integrated database retrieval system