KEGG T02983: 102624417

Citrus sinensis (Valencia orange): 102624417

Entry

102624417         CDS       T02983

Name

(RefSeq) RNA polymerase II C-terminal domain phosphatase-like 2 isoform X2

K18998

RNA polymerase II C-terminal domain phosphatase-like 1/2 [EC:3.1.3.16]

Organism

cit Citrus sinensis (Valencia orange)

Brite

KEGG Orthology (KO) [BR:cit00001]
09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:cit01009]
    102624417
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:cit03021]
    102624417
Enzymes [BR:cit01000]
3. Hydrolases
  3.1  Acting on ester bonds
   3.1.3  Phosphoric-monoester hydrolases
    3.1.3.16  protein-serine/threonine phosphatase
     102624417
Protein phosphatases and associated proteins [BR:cit01009]
HAD phosphatases
  Fcp/Scp phosphatases
   102624417
Transcription machinery [BR:cit03021]
Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Others
     102624417

SSDB

Motif

Pfam:

NIF dsrm DSRM_2

Other DBs

NCBI-GeneID:

102624417

NCBI-ProteinID:

XP_006481008

LinkDB

Position

6:complement(join(16533096..16533099,16533179..16533255,16533848..16534008,16534329..16534425,16534980..16535033,16535112..16535245,16535734..16535791,16535866..16536086,16536227..16536359,16536634..16536723,16536815..16536920,16537020..16537090,16537260..16537417,16537752..16537962,16538521..16538991,16539240..16539509))

AA seq 771 aa
MSRLGYKNIVYHGDVCLGELDTILVSDENFQFPNNEIRIRHISPSSERCIPLSILHTISS
FSLRCKLESSAPVEQPHLINLHASCFYEFKTAVVVIGDEEIHLVAMPSKQKKFPCFWCYS
VSSGLYNSCLGMLNLRCLAIVFDLDETLIVANTMKSFEDRIEALRSWIAREPDQIRASGM
SAELKRYMDDRTLLKQYTENDCVMDNGKVFKVQQEEVPPPSENYERIVRPVIRIPERNLV
LTRINPENRDTSVLVRLRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLLDPEG
HLIGSKQLLDRVVCVKSGSRKSLLNVFQRGLCHPKMAMVIDDRCKVWEDKDQPRVHVVPA
FTPYYAPQAETANAVPVLCVARNVACNVRGCFFKEFDENLLRSISEVFYEDEAVNLPAAP
DVSNYLMSEDANFAPNGSTNAPMSEGLNGLEVERRLNQSDEKYVVDSGLPSMKNSSDLKS
ETSLLPVAVASNATVPATVVPSQKPGLLGAPIRRDNSSMKHGFDLRNQNSAQPPLPKLHG
QGGWIVEEEVNRVLPNNRPVSIATGLPSHASQAKGEEAIMAHDLHKQNLPPASQPPEIGV
SQNHVSSNSREFQTEGGKTNLLPSYLSIGVLQEIGKRCSSKVEFRSVVSTSKDLQFSVEV
LFTGEKIGVGMGKTRKDAQQQAAENALHYLAEKYVAYITPRSGAMDRDFDKLSLENENGF
LWDTIISESNEGLGEDGLRKESTPEASEVEPGSTYASLGNQQVQKRPNVPK

NT seq 2316 nt +upstreamnt +downstreamnt
atgagtcgtttagggtataagaatatcgtctatcacggcgacgtttgtttgggagagcta
gatactattctcgtctcggacgagaatttccagttcccgaacaacgagattcgaattcgt
cacatatcgcctagtagcgagcgatgcattcctctctcaattctccacacgatttcttca
ttttcgcttcgttgcaagctcgaatcatcggctccagtcgagcagcctcatttgattaat
cttcacgcctcttgcttctacgaattcaagacagcagttgttgtgattggagacgaggag
attcatttagtggcaatgccaagtaagcagaagaagtttccgtgtttttggtgttattca
gtttcgtcaggtctatacaattcttgtttggggatgctgaatttacggtgtttagcaatt
gtattcgatcttgacgaaacacttattgttgccaacacgatgaaatcgtttgaggacaga
attgaggctttaagaagttggattgcacgtgagccggatcaaatacgggcttcaggaatg
tctgctgagttgaagcggtacatggatgatcgaacgttattgaagcagtacactgagaat
gattgtgttatggataacgggaaggtgtttaaggttcaacaagaggaggttcctcctcca
tcagagaattatgagagaattgttcggcctgtgattagaattccagaaaggaatcttgtt
cttactcggattaaccctgagaatcgtgataccagtgtgcttgtgaggttacgacctgca
tgggaggatttaagaagttatttaattgcaaaaggacgcaaacgatttgaagtttatgtt
tgtactatggctgaaagagattatgccttagaaatgtggaggcttcttgacccagaggga
catctgataggttcaaaacaactcttggaccgagttgtttgtgttaaatcaggttccagg
aaatctttgctaaatgtctttcaacgtggtttgtgccatccaaagatggcaatggttatt
gatgaccgttgtaaggtttgggaagataaggaccagcctagagttcatgtagttccagct
ttcactccatattatgcccctcaagcagagacagcgaatgcagttccagtcctctgcgtg
gcaagaaatgttgcatgcaatgtcagaggttgttttttcaaggagtttgatgagaattta
ttgcgtagtatatctgaagtcttttatgaagatgaggcggtaaatttacctgctgctcct
gatgtgagcaattacttgatgtcagaggatgccaattttgcaccaaatggcagcactaat
gctccaatgagtgaaggactgaacggacttgaagtggaaaggagactgaaccaatctgat
gagaaatatgttgtggactcaggtttgccttctatgaaaaatagctctgatttgaaatct
gaaacatctctgcttcctgttgctgttgcttcaaatgccactgtcccagcaacagttgtg
ccttctcagaaacctggtttgcttggagctcccattaggcgagacaacagctctatgaag
catggttttgatttaaggaatcaaaactcagctcaaccccctctacctaaattacatggg
cagggaggctggatagttgaagaagaagttaaccgagtgcttccaaataatcgccctgtt
tccattgccactggtttaccctcacatgcctcccaagcgaagggcgaagaggcaattatg
gcacatgatttgcataaacagaatcttccaccagcaagtcagcctccagagattggggta
tcccagaatcacgtgtcatcaaatagcagagaattccagactgaaggtggaaagacgaac
ttgctaccatcctatctgtctattggtgtgctacaggaaattggaaagaggtgcagctcc
aaggtcgagttcaggtctgttgtaagcacgagtaaggatttacaattttctgttgaggtt
ttgtttactggtgaaaagataggcgttggaatgggtaagacaaggaaggatgctcaacaa
caagctgctgagaatgcccttcattacttggcagaaaagtatgtagcatatatcacaccc
cgttctggagcaatggacagagatttcgacaagctttctcttgaaaatgaaaacggattt
ctgtgggacaccatcatttcagaatcaaatgaagggctgggagaagacgggttacgcaag
gaaagcactcctgaggcttctgaagttgaacctgggagtacctatgccagtttggggaat
cagcaagtgcaaaagcgtcccaatgtccccaagtag

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