Citrus sinensis (Valencia orange): 102624520
Help
Entry
102624520 CDS
T02983
Name
(RefSeq) probable pectate lyase 19
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
cit
Citrus sinensis (Valencia orange)
Pathway
cit00040
Pentose and glucuronate interconversions
cit01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cit00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
102624520
Enzymes [BR:
cit01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
102624520
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
Pec_lyase_N
Beta_helix
NosD
Motif
Other DBs
NCBI-GeneID:
102624520
NCBI-ProteinID:
XP_006484673
LinkDB
All DBs
Position
4:complement(join(21769842..21770066,21770224..21770466,21770618..21771269,21771454..21771644))
Genome browser
AA seq
436 aa
AA seq
DB search
MELAGLRLIFLFSFATLMPCLSAHIAEVNEVWRRRAEEAMQTTEQYYDPNPVAVANHLNM
KVQDLSKQAIAKRGLLNAESGQCEATNPIDKCWRCKENWAEDRQALAGCALGFGSKATGG
KGGKIYEVTDPSDNDMENPKVGTLRHAVIQKEPLWIIFAKDMNIKLQQELIVQGSKTIDG
RGAKVHIANGAGIMLQFVKNVIIHGIHIHNISPCSGGMIRDSVDHVGKRGQSDGDAVSIF
GSSNIWLDHLTLSQAHDGLIDAIQASTAITISNCHLSNHDKAILLGASDTFTEDKKMQVT
VAFNRFDKGLVQRMPCVRFGFAHVVNNDYNQWEMYAIGGLQGPTILSQGNRFFASNNQNT
KEVTKRMNCSPEEGKSWIWRSEGDVFLNGAYFNSSGDPKKQIQYQMDNVIKPESGTEVER
ITKFAGALVCKPGQEC
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
atggagctagctgggctaagattaatctttctcttctcctttgccactttaatgccctgc
ttatcagctcatatcgctgaggtcaacgaggtatggaggcgacgagctgaagaagccatg
cagaccaccgagcaatattatgatccaaaccccgtagctgttgccaaccacctaaacatg
aaagttcaagatttgtcaaagcaagctattgccaagcggggcttgttgaatgcagaatca
gggcaatgcgaggcaacaaacccaattgacaaatgctggcgttgtaaagagaactgggca
gaagatcgacaggcgctagcaggttgtgcacttggtttcggcagcaaagccaccggagga
aaaggtggaaaaatttatgaggtgactgatccttctgataatgatatggagaaccctaag
gttgggactctacgccatgcagtgatccaaaaagaacctttgtggatcatctttgccaaa
gatatgaacatcaagttgcaacaagaattgattgtccagggtagcaagactatagatggg
cgtggagccaaagtgcacattgccaatggagctggaattatgctacagtttgtgaaaaat
gtgattattcatgggattcatattcataacatttctccttgtagtggtggtatgattagg
gattctgtggatcatgtaggaaagaggggtcaaagtgatggggatgctgtttcaatattt
ggttcgtcaaatatttggcttgatcatcttacattatctcaagcccatgatgggctcatc
gatgccattcaagcatccacggccatcactatttcaaattgccatttgtccaaccatgat
aaggcaattctgttaggtgcaagcgatactttcacagaagataaaaagatgcaagtgact
gtagcattcaaccgttttgacaaaggactcgttcagagaatgccatgcgttagatttggt
ttcgcacatgttgtgaataatgattacaatcaatgggaaatgtatgcaattggtggtctc
caaggccccaccattcttagccagggtaatagattctttgcctcgaataaccagaatact
aaagaggtgaccaagagaatgaattgcagccctgaagaaggaaagagttggatatggaga
tcggagggagatgtattcttgaatggagcttactttaattcatctggtgacccaaaaaag
caaatccaataccaaatggataatgtaattaaaccagagtcaggaacagaagttgagagg
atcacaaaatttgccggggcacttgtctgcaagccaggccaggaatgttaa
DBGET
integrated database retrieval system
