KEGG   Citrus sinensis (Valencia orange): 102625009
Entry
102625009         CDS       T02983                                 
Name
(RefSeq) ATP-dependent RNA helicase eIF4A isoform X1
  KO
K03257  translation initiation factor 4A
Organism
cit  Citrus sinensis (Valencia orange)
Brite
KEGG Orthology (KO) [BR:cit00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cit03019]
    102625009
   03012 Translation factors [BR:cit03012]
    102625009
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:cit04147]
    102625009
Messenger RNA biogenesis [BR:cit03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    eIF4F and regulatory proteins
     102625009
   mRNA cycle factors
    Stress granule specific factors
     102625009
Translation factors [BR:cit03012]
 Eukaryotic type
  Initiation factors
   eIF-4
    102625009
Exosome [BR:cit04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   102625009
  Exosomal proteins of bladder cancer cells
   102625009
SSDB
Motif
Pfam: Helicase_C
Other DBs
NCBI-GeneID: 102625009
NCBI-ProteinID: XP_006466615
LinkDB
Position
7:complement(join(3395141..3395200,3395702..3395799,3395880..3395919,3396096..3396329,3396704..3396847,3396934..3396982,3397088..3397146))
AA seq 227 aa
MAIDGVESPCPPCQSPSHFSQPRHFYVAVDRLQFKMETLVELLHLVVAGRRPGLPMIVCC
SSRDELDAVCSAVSNLADISFSSLHSDLAETERTLILEEFRHTAMKWSQKVTEQSGDESE
TGKDEHKSHMIVVTDACLPLLSSGESAISARVLINYELPTKKETYIRRMTTCLAADGSVI
NIVVGGEVVTLRSMEESLGLIVAEVPINRDSTHSTADSPDSSHSSSH
NT seq 684 nt   +upstreamnt  +downstreamnt
atggcgatcgatggagtcgaatctccctgtcctccatgtcagtctccttcacatttcagt
caaccacgtcacttctatgtcgccgtcgacagactccagttcaaaatggaaacgttggtg
gaactattacatttagtcgtggctgggcggcggccgggcttgccaatgatagtctgctgc
agctcaagggacgagcttgacgccgtttgctctgccgtctctaacctcgctgacatttca
ttctcatctctgcacagtgacctggccgaaacggagcgaacgctgattttggaggaattt
cggcatacagcaatgaaatggagccaaaaagtcactgaacagagtggagatgaaagtgaa
actggaaaagatgagcataagtctcatatgattgttgtgacagatgcttgccttccactt
ctttcttctggagaatctgctatatctgctcgtgttctgataaactatgaattgccaaca
aagaaggaaacatatataaggcgcatgacaacttgtttggcagcagatggtagtgtgatc
aatatagttgttggaggtgaagtagtaaccctcagaagtatggaagaaagccttggcctt
attgtagctgaggtgcccataaatcgtgacagcacacacagcacagcagactcaccagac
agctcacacagcagcagtcactga

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