KEGG   Citrus sinensis (Valencia orange): 102625041
Entry
102625041         CDS       T02983                                 
Name
(RefSeq) ABC transporter A family member 1 isoform X1
  KO
K05643  ATP-binding cassette, subfamily A (ABC1), member 3
Organism
cit  Citrus sinensis (Valencia orange)
Pathway
cit02010  ABC transporters
Brite
KEGG Orthology (KO) [BR:cit00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   02010 ABC transporters
    102625041
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:cit02000]
    102625041
Transporters [BR:cit02000]
 ABC transporters, eukaryotic type
  ABCA (ABC1) subfamily
   ABCA1, 2, 3, 4, 7, 12, 13 subgroups
    102625041
SSDB
Motif
Pfam: ABC_tran ABC2_membrane_3 AAA_21 R1_ABCA1 SMC_N RsgA_GTPase AAA_29 nSTAND3
Other DBs
NCBI-GeneID: 102625041
NCBI-ProteinID: XP_006492929
LinkDB
Position
9:join(8520115..8520201,8520481..8520560,8521360..8521528,8522533..8522615,8523264..8523480,8524684..8524913,8525050..8525110,8525257..8525343,8526017..8526249,8526371..8526485,8526588..8526677,8527382..8527602,8527681..8527793,8529022..8529128,8529505..8529567,8531397..8531483,8532620..8532718,8532812..8532996,8533106..8533160,8533274..8533345,8535382..8536086,8536250..8536428,8536919..8537129,8537360..8537443,8538866..8538907,8539003..8539099,8539707..8539834,8539931..8540035,8541098..8541244,8542233..8542496,8542576..8542711,8543143..8543222,8543335..8543442,8543739..8543889,8544575..8544711,8544799..8544873,8545009..8545312,8545970..8546103,8547031..8547089,8547180..8547261)
AA seq 1893 aa
MGTAKRHLKAMLRKNWLLKVRHPFVTAAEILLPTVVMLLLIAVRTRVDTRIHPAQPYIRK
DMFVEIGKGVSPNFVQALELMLAKGEYLAFAPDTEETRTMINLMSIKFPKLKLVSRIYKD
ELELETYIRSDLYGTCSQVKDCLNPKIKGAVVFHDQGPELFDYSIRLNHTWAFSGFPDVK
TIMDTNGPYLNDLELGVNIIPTMQYSFSGFLTLQQVLDSFIIFAAQQTGANVATENVEIP
PSNLSGTHLSLKQPWTLYSPSNIRMVPFPTREYTDDEFQSIIKRVMGVLYLLGFLYPISR
LISYSVFEKEQKIREGLYMMGLKDGIFHLSWFITYAAQFAVSSGIITACTMDSLFKYSDK
TVVFTYFFSFGLSAITLSFFISTFFARAKTAVAVGTLSFLGAFFPYYTVNDEAVPMVLKV
IASLLSPTAFALGSVNFADYERAHVGLRWSNMWRASSGVNFLVCLLMMLLDTLLYGVIGL
YLDKVLPKENGVRYRWNFIFQNCFRRKKSVIKHHVSSAEVKINKKLSKEKECAFALDACE
PVVEAISLDMKQQEVDGRCIQIRKLHKVYATKRGNCCAVNSLQLTLYENQILALLGHNGA
GKSTTISMLVGLIPPTTGDALVFGKNITADMDEIRKGLGVCPQYDILFPELTVREHLEMF
AVLKGVKEELLERVVAEMVDEVGLADKVNIVVRALSGGMKRKLSLGIALIGDSKVVILDE
PTSGMDPYSMRLTWQLIKKIKKGRIILLTTHSMDEAEELGDRIAIMANGSLKCCGSSLFL
KHQYGVGYTLTLVKSAPDASAAADIVYRHIPSALCVSEVGTEITFKLPLASSSSFESMFR
EIESCIRKSVSKVEADATEDTDYLGIESFGISVTTLEEVFLRVAGCNLDESECISLRNNL
VTLDYVSAESDDQAPKRISNSKLFGNYKWVFGFIVTVVQRACTLIVAAVLGFLNFLIKKC
CTCCIISRSMFWQHCKALFIKRAVSARRDRKTIVFQLLIPAIFLLVGLLFLKLKPHPDML
SVTFTTSNFNPLLSGGGGGGPIPFDLSWPIANEVSKYIKGGWIQRFKQSSYRFPNAEKAL
ADAVDAAGPTLGPVLLSMSEYLMSSFNESYQSRYGAIVMDDQNDDGSLGFTVLHNSSCQH
AGPTFINVMNTAILRLATGNRNMTIRTRNHPLPTTQSQQLQRHDLDAFSVSIIISIAFAF
IPASFAVAIVKEREVKAKQQQLISGVSVLSYWTSTYIWDFISFLFPSSCAIILFYIFGLD
QFVGRDCLLPTVLIFLGYGLAIASSTYCLTFFFSDHTMAQNVVLLVHFFTGLILMVISFI
MGLLETTRSANSLLKNFFRLSPGFCFADGLASLALLRQGMKDKTSDGVFDWNVTSASICY
LGCESICYFLLTLGLELLPSHKWTLMTIKEWWKGTRHRLCNTPSSYLEPLLQSSSESDTL
DLNEDIDVQVERNRVLSGSVDNAIIYLRNLRKVYPGGKRSDAKVAVHSLTFSVQAGECFG
FLGTNGAGKTTTLSMISGEEYPTDGTAFIFGKDIRSDPKAARRLIGYCPQFDALLEYLTV
QEHLELYARIKGVAEYRMDDVVMEKLVEFDLLKHAKKPSFTLSGGNKRKLSVAIAMIGDP
PIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCTRIGIMVGGQ
LRCIGSPQHLKTRFGNFLELEVKPTEVSSVDLEDLCQIIQERVFDIPSQRRSLLDDLEVC
IGGIDSISSENATAAEISLSQEMLLIVGCWLGNEERIKTLISSSSSPDRIFGEQLSEQLV
RDGGIQLPIFSEWWLAKEKFAVIDSFILSSFPGSTFQGCNGLSVKYQLPFSEGLSVADVF
GLLEQNRNRLGIAEYSISQSTLETIFNHFAANS
NT seq 5682 nt   +upstreamnt  +downstreamnt
atgggaactgctaagaggcatttaaaagctatgcttcgaaagaattggctgctcaaagtt
cgtcacccttttgttactgctgctgagattttgcttcctacggttgtaatgttgttgttg
atagcggtaaggacacgggttgatacgcgaattcaccccgctcaaccgtacataaggaaa
gacatgtttgtcgaaataggcaaaggcgtatcccccaattttgtacaagctttggaatta
atgctggcaaagggagagtatttggcttttgctccagatacggaagaaacgaggactatg
attaacttaatgtcgattaaatttcccaaattgaagctagtcagcagaatttacaaagat
gagcttgagttggaaacctacataagatcagacctctatggtacctgcagtcaagtcaag
gattgtttgaatccaaaaattaaaggagcagtggtttttcatgatcaaggtcctgagcta
tttgattatagcatacgcctcaaccacacgtgggcattctctgggtttcctgatgttaaa
actattatggatacaaacggcccttatctcaatgacctagaattgggtgttaatataata
ccaacaatgcaatacagcttcagtggatttttgactcttcagcaggtgttagattcgttc
ataatttttgcagcccagcaaactggagctaatgttgcaactgaaaacgtagaaattcca
ccatcaaacttgtctggcacacatttgtccctcaagcagccatggaccctgtatagccct
tctaatatacgaatggttccctttccaactcgtgaatacactgatgatgagttccagtct
attatcaagagggtcatgggagtactgtatttgctaggttttctctatccaatttctcgc
ttgatcagctattctgtgtttgagaaggaacaaaagataagagaaggtctgtacatgatg
ggcttgaaagatggcatatttcatctctcttggtttattacatatgctgcacagtttgca
gtttcgtctgggatcattacagcttgtaccatggacagccttttcaagtatagtgataag
acagtggtgtttacttatttcttttcttttggactcagtgcaattacgctctcttttttt
atctctacatttttcgcacgagcaaaaacagctgtggcagttggaaccctctcttttctt
ggggcgttctttccgtattatactgtgaatgatgaggctgtacctatggtattgaaggtc
attgcttctcttctttctcctacggcgtttgctctaggatctgtcaactttgcagattac
gagcgtgctcatgttggacttcgttggagcaacatgtggcgggcatcatctggagtgaat
tttttggtctgcctcttaatgatgttgcttgacactctgctatatggtgtgattggtctt
tacctggataaggttcttcctaaagaaaatggagtccgctatcgatggaatttcatattc
cagaattgtttccggagaaagaaaagtgttattaaacatcatgtatccagtgcagaagtt
aaaattaataagaagctatccaaagaaaaggagtgtgcttttgcattagatgcttgtgaa
cctgttgtggaggcaataagcttggacatgaagcagcaagaagttgatggaagatgtatt
caaattaggaaactgcataaggtatatgccactaaaagggggaattgctgtgcagttaac
tcactacagctaaccttgtatgaaaatcagattcttgcacttcttggacacaatggagcc
ggtaaaagtacaacaatatccatgcttgttggccttattcctccaacaacaggggatgct
ttggtctttggaaagaatatcactgcagacatggatgagatacggaaaggactaggggtg
tgccctcaatatgatattctttttcctgagctaacagtgagagaacatctggagatgttt
gcagttttgaaaggtgttaaagaagaacttttggagcgtgttgttgctgagatggttgat
gaagtgggtttggctgataaagtcaacattgttgtgagggctctttccggtggcatgaag
aggaaattgtctcttggaattgcactgataggagacagtaaggttgttattcttgatgaa
cctactagtggaatggacccatactcgatgcgactgacctggcagttaattaaaaaaatt
aaaaaaggaaggattatattactaactacacactcaatggatgaagctgaagaactcgga
gatcggatagctatcatggctaatggttcattgaaatgctgtggaagttcccttttcctg
aagcatcagtatggggtcggttatactcttactttggtgaagtctgcacctgatgcttct
gcagctgctgatattgtttatcgtcatattccatcagcactgtgtgtgagtgaggttgga
actgagattaccttcaagttgcctctggcatcatcatcgtcctttgagagtatgtttaga
gaaatagaaagttgcataagaaaatcagtttcaaaggtggaagcagatgctactgaagat
acagattatcttggcattgaaagttttggtatatctgtcacaactctggaggaggtattc
ctaagagttgcaggatgcaacctggatgaatctgaatgtattagcctgcgaaataatctt
gtcacacttgactatgtttctgctgaatctgatgatcaagctcccaaaagaatttccaac
tctaaattattcggaaattataaatgggtttttggatttattgttactgttgtacagaga
gcctgtactttgattgttgctgctgttctcggtttcctgaacttcttaattaagaagtgc
tgtacctgttgtatcatttcaagatcaatgttttggcaacattgtaaagcgttatttata
aagagggcagtatccgctcgaagggaccgcaaaacaatagtgttccagcttttaattcct
gccatcttcttgcttgttggtcttctgtttctaaagcttaagccacatcctgatatgctg
tctgtgacctttacaacttcaaattttaatcctcttttaagtggtggcggtggcggtggt
ccaattccttttgatctttcctggccaattgcaaatgaggtctcaaagtacatcaaaggg
gggtggattcaaagatttaaacagagttcatatagattccctaatgcagaaaaggcttta
gcggatgcagttgatgcagcagggccaactttgggaccagttctactctccatgagcgaa
tatttgatgtcgagcttcaatgagtcctatcagtcaaggtatggtgcaattgtgatggat
gatcagaatgatgatgggagtttggggtttactgtactacataacagctcctgtcagcat
gctggtccaacttttatcaatgtcatgaacacagcaattcttaggcttgctactgggaat
agaaatatgacaattaggacacgcaaccaccctctgcccacgacacaaagccagcagtta
caacgtcatgatctggatgccttctctgtttcaattattatcagtattgcgttcgcgttt
attcctgcctcatttgctgttgccattgtaaaggagcgtgaagtgaaagctaagcagcag
caattgattagtggggtttctgtactttcatattggacttctacgtacatatgggacttc
atcagcttcttatttccttcaagttgtgcaataattctcttctacatctttggtcttgat
cagttcgttggaagggattgtttgttgccaacagtcctcatttttttggggtatggattg
gcaatcgcatcatcaacatattgccttactttcttcttttctgaccacacaatggctcag
aatgtggttcttttggtccatttcttcactggactcattctgatggttatctcatttatt
atggggcttttagagacaacaagaagtgcaaattctcttctcaagaatttcttcagatta
tcaccagggttttgctttgctgacgggcttgcttcactggctcttctacggcaagggatg
aaagataaaactagtgatggggtttttgattggaatgttacttctgcctccatttgttac
cttggatgtgagagtatttgctactttctcttaacacttggacttgagctcttgccttct
cacaaatggactctaatgacaattaaggagtggtggaaaggaactagacatcgcctgtgt
aatactccttcgagttacttggaaccccttctgcaatcttcctcagaaagtgatactctg
gatctcaatgaagatatagatgtacaggttgaaagaaatagggtactttctggctccgtg
gataatgccatcatctacttgcgtaatctaagaaaggtttatcctgggggaaagcgttct
gatgcaaaagttgctgtacattcattgactttctcagttcaagcaggagagtgctttggg
ttcttgggaacaaatggagctgggaagactactactttgtctatgatatctggagaagaa
tatccaactgatgggactgcttttatttttggcaaagatatacgttcagatcccaaggct
gcccgtcggcttattgggtattgcccccaatttgatgctttattggaatatttgactgta
caagagcatcttgagctttatgctaggataaaaggagtcgcagaatacaggatggatgat
gttgttatggaaaagttagttgagtttgacttgttgaagcatgccaaaaaaccatcattt
accctgagcgggggtaacaagcgtaaattatcggttgcaattgcaatgattggagatcct
ccaattgttattcttgatgagccatccacaggcatggatccaattgctaaacgattcatg
tgggaagtgatatctcgtttatcaactagacaagggaagacagcagttatccttacaacc
cacagcatgaatgaagctcaagcattatgcaccagaattggaataatggttggcggccag
cttagatgtattggaagtccccagcatttaaaaacacggtttgggaattttcttgagcta
gaggttaaacctactgaggttagctcggtagatttggaagacctttgccagattattcaa
gaaagagtatttgacattccttctcagcgaaggagcttgttagatgaccttgaagtttgc
attggtggtattgactccatttcatcagaaaatgcaacggcggcagaaattagcttgtca
caggaaatgttacttatagttgggtgctggcttggcaatgaagaaagaataaaaacactt
ataagttcctcctcttctcctgatagaatatttggggaacaattgtctgagcagttggtt
cgagatggaggtatacaattgccgatattctccgagtggtggttggccaaagaaaagttt
gcggtgattgattctttcattttatcttcatttcctggctcaacatttcaggggtgcaac
gggttgagtgtcaaatatcagctaccattctcggaaggtctctcagttgccgacgtcttt
gggctcttagaacagaacagaaatcgactgggaattgcagaatacagcatcagccaatca
acgttggaaaccatatttaatcattttgcagctaactcatga

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