KEGG   Citrus sinensis (Valencia orange): 102625174
Entry
102625174         CDS       T02983                                 
Name
(RefSeq) E3 ubiquitin-protein ligase UPL4
  KO
K10590  E3 ubiquitin-protein ligase TRIP12 [EC:2.3.2.26]
Organism
cit  Citrus sinensis (Valencia orange)
Pathway
cit04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:cit00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    102625174
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:cit04121]
    102625174
Enzymes [BR:cit01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.26  HECT-type E3 ubiquitin transferase
     102625174
Ubiquitin system [BR:cit04121]
 Ubiquitin ligases (E3)
  HECT type E3
   102625174
SSDB
Motif
Pfam: HECT Arm ARM_ARMC5 Nuc_deoxyri_tr3 UTP15_C Htt_N-HEAT_1
Other DBs
NCBI-GeneID: 102625174
NCBI-ProteinID: XP_024956054
LinkDB
Position
6:complement(join(11853878..11853943,11854058..11854141,11854245..11854373,11854466..11854534,11854617..11854697,11855423..11855527,11855625..11855855,11855963..11857120,11857442..11858633,11858720..11858841,11858920..11859072,11859542..11859703,11859805..11859963,11860072..11860188,11860304..11860414,11860511..11861143))
AA seq 1523 aa
MGNRGQKRMEMAVDLPDDKRACSSLDFRPSTSNSSVQTHLNSTNSTPETHHNDMDTSSSA
SASSRSEEEPEKDAGYGSCDSDDAEPRHRGLRELQRRRSSSDHGKLRSILACLSEDTDPS
RQITSLTELCEVLSFAMEDSLSSMMADSLSPVLVKLARHETNPDIMLLAVRAITYLCDIF
PRSSGLLVRHDAVPALCQRLKAIEYLDVAEQCLQALEKISRDQPHACLEGGAIMAALTYI
DFFSTSIQRVALSTVANICKKLPSECPSHLMEAVPILSNLLQYEDRQLVESVAICLIKIA
EQLSQSSQMLDELCSHGLINQTTHLLNLNSRTTLSQPIYYGLIGLLVKISSGSIVAFKML
YELNIGRILKDILSTYDLSHGMSSPHMVDGHCNQVHEVLKLLNELLPTSVGDQCAQQVLD
KQSFLVDRPDLLQNFGMDILPMLIQVVNSGANIFVCYGCLSVINKLVYLSKSDMLIELLK
SANIPSFLAGVFTRKDHHVVILALEIAEMILQKLSDTFLNSFVKEGVFFAIDALLTPEKC
SQLFPAFSGIQLCPSSSQKCAGREVLRCLCNAFDTGLSSSASEKQSCKLDKDSVHNLAKS
IITKYFSPELFGSDKGLTDILQDLRSFSAALTDLMNVCTNNEAHARDEEKFYCILHQIME
KLNGREPVSTFEFIESGIVKSLVTYLTNGLYLRDNAELHIPHNDLFVVEKRFEVLARLLL
PYSDNLSEDSLVSALIQKLQSALSSLENFPVILSHSFKLRSSYATVPYGRCISHPCLRVR
FVRGDGETCLSDFSEDLLTVDPFSSLEAIEGYLWPKVTIKESKDVESDCLMDQMNGQPLH
LSSNSKSILGESSESMEHESTSAVLTPVKHDSISSTSGVPKMQDCKIKLTFDLDGQKLER
TLTLYQAILQKQIKTDGEVIAGAKLWSQVYTIIYRRAMESKCNDPKKCVHLHPMSSVSDG
DEARLHCASFFSSLFACQLAFELDNSSPIYDILFLLKSLEGMNRLTCHLISHERIRAYAE
GRFDNLDDLKVAVHSLRQNDFVNSKLTEKLEQQMRDSAAVSTGGVPSWCNQLMASCPFLF
SFEARCKYFQLAAFAPRQVQPHPLYRSNSGAPTDRRSAAVGLPRKKFLVCRNRILESATQ
MMDQHARNRTLVEVEYDEEVGSGLGPTLEFYTLVSHEFQKSGMGMWRDDHSSVTVRKSLE
IGNSDIVMSPFGLFPRPWSSAVDTSYGIQFSDVLKKFVLLGQVVAKALQDGRVLDLPFSK
AFYKLILGKELSLYDIQSFDPELGRTLLEFQAIANRKKHLESTSEERSMFGLESCFRNTR
VEDLCLDFTLPGYPDYVLTFGPDHKMVNMNNLEDYAELVVDATIHTGIFRQMEAFKSGFC
QVFPIEHLKIFTEEELERLFCGERDFLAFNDLLDHIKFDHGYTASSPPILNLLEIIREFD
YDQRRAFLQFVTGAPRLPPGGLASLNPKLTIVRKHCSNCAHADLPSVMTCANYLKLPPYS
SKEMMKEKLLYAITEGQGSFHLS
NT seq 4572 nt   +upstreamnt  +downstreamnt
atgggaaatcgtggacaaaagcgcatggaaatggctgttgatttgccggatgataaaaga
gcttgtagttcattggactttcggcctagcacatctaactcatcagtccaaactcacttg
aattccacaaactccactcctgaaacccatcataatgatatggatacttcttcttctgct
tctgcttcaagccgatcagaagaagaacctgaaaaagatgcagggtatggttcgtgtgat
tctgatgatgcagaaccaagacacagaggtctcagggagttacagaggagaagatcctct
agtgatcatgggaaattgaggagtattttggcgtgtttgagtgaagatactgatccttct
aggcaaataacttcactgactgagctttgtgaagtgttgtcatttgctatggaggattca
ctttctagcatgatggcagactcgttgtccccagttcttgtaaagctggcaaggcatgag
actaatccagatataatgttattggctgttagagctataacatatttatgtgatatattt
cctcgatcatcgggtctgcttgttcgacacgatgcagttcctgctctttgtcaaagatta
aaggcgattgagtacttggatgtagctgagcagtgtttgcaagcattggagaaaatttcc
cgggatcaaccacatgcttgcttagagggtggggctattatggctgctttaacttatatt
gatttcttctcgactagtatacagagagttgcactttccactgtagccaacatatgtaag
aaacttccttcagaatgtccgtcacatttaatggaggctgttcccatattgagcaatctt
cttcagtacgaggatcgacagctggttgagagtgtagccatttgtttgataaaaatagca
gagcaattaagtcaatcttctcagatgctggatgaactttgtagccatgggctgattaat
cagaccacgcatctcttaaacttgaatagccgaactactctatcccagccaatttactat
ggtttgattgggttacttgtcaaaatttcttctggttcaattgtagctttcaaaatgtta
tacgagcttaatattggcaggatattgaaggatattttatcaacttatgacctctcacat
ggaatgtcttctcctcatatggttgatggtcattgcaatcaggtacatgaagttttgaag
ttgctaaatgagcttcttcctacttcagttggagatcagtgtgcgcaacaagtgttggat
aagcaatcatttttagttgatcgtcctgatcttcttcaaaactttggaatggatatactt
cccatgttgatccaggtggttaattctggtgcaaatatctttgtttgctacggatgcctc
tctgtaatcaacaagttagtttatttgagcaaatctgacatgcttattgaattgcttaag
agtgccaacattccgagctttttggctggagtgtttactcgaaaggaccatcatgtggtc
atattagctctagagattgctgaaatgatcctgcaaaagctttctgatactttcttaaac
tcttttgtaaaagagggtgtcttttttgccattgatgcactattaacgccagaaaaatgt
tcgcagctgtttccagcatttagtggcatccagctttgccctagctcaagtcagaagtgt
gctggaagggaggttctgagatgcttatgtaatgcttttgatactggtctgtcttcttca
gcttcagaaaaacaatcttgcaagcttgataaagattctgttcataatcttgcaaagagc
attataaccaaatacttctcaccagaattatttggctctgataaaggactgactgatatt
cttcaagaccttagaagtttttctgctgctttgaccgatttgatgaatgtgtgcactaat
aatgaagctcatgcacgggatgaagagaaattttattgtattttacatcagattatggaa
aagcttaatggaagagaaccggtttccacttttgagttcatcgagagtggaattgtcaaa
tcgttggttacatacctgacaaatggattgtatctgagagacaacgcggagcttcatatt
ccacataatgatttatttgtagtagaaaaacgatttgaggtgcttgcaagactacttttg
ccttattcagacaatctctctgaggactcactggtgtcagctctgatacagaaattacaa
agtgcattgtcgtctttagaaaatttccctgttattttgagtcattcattcaagctgaga
agttcatatgctactgttccatatggacgctgcatatcacatccatgtctcagggttcgt
tttgtgaggggagatggggagacatgcttatctgatttctcagaagatcttttgactgtt
gatcctttttcttctttggaagctattgaaggatatctgtggcctaaagttactatcaaa
gaatccaaagatgtagaatcagattgcctgatggatcaaatgaacggccaacctcttcat
ttgtcatcaaattccaaatctatcctaggggaaagttcagaatctatggaacatgagagc
acttctgctgtattaactcctgtgaagcatgatagcatatcctctacctctggtgttccg
aagatgcaggattgtaagatcaaacttacgtttgacctagacgggcaaaagctggagcgg
acattaacattgtatcaggcaattcttcaaaagcaaataaaaacagatggtgaagttatt
gccggggcaaaattgtggagccaagtatacacaataatttatagaagagccatggaatct
aaatgcaatgatcctaaaaaatgtgtccatttgcatccaatgtcctctgtatcagatgga
gatgaggcacgtttgcattgtgcttcatttttctccagcttgtttgcttgtcaactggcc
tttgagttggataattcaagtcctatttatgatatattgttcctacttaagagtttggaa
ggcatgaacaggttaacatgtcatttgatatctcatgagagaatacgtgcatatgctgaa
ggcagatttgataacttggatgacctgaaggtagcagttcactcattgcgacagaatgat
tttgtgaatagtaagttgacagaaaaactagaacaacagatgcgcgacagtgcggctgtt
tcaactggtggtgtgccgtcatggtgtaatcagttaatggcttcatgcccattcttgttt
agttttgaagcaaggtgcaagtattttcagttagcagcatttgctccacgacaggttcag
cctcatccattatatcgcagtaactcaggtgcccctactgacaggcgatcagctgctgtt
ggcttgccgcggaagaagtttttagtttgccggaaccggattctggagtctgccacacaa
atgatggatcagcatgctcgtaatagaacacttgtcgaagtggaatatgatgaagaagtt
ggttctggtcttggtcctacattagagttttatactcttgtcagtcatgagtttcagaag
tctggtatgggcatgtggagagatgatcacagttcagtaactgtcaggaaaagcttggaa
attgggaattctgatattgtaatgtctccttttggtctgtttccccgtccctggtcatct
gccgtagatacatcatatgggatacagttctcagatgtattaaaaaagtttgttcttttg
ggtcaagttgtggcaaaggctcttcaagatggaagggtcttggatctgcctttctccaaa
gccttttataagctcattcttggaaaggaacttagtttgtatgacatccaatcatttgac
cctgagcttggtaggactctgctggagtttcaggccattgctaatagaaaaaaacatttg
gaatcaacttctgaagaaaggtcaatgtttggccttgaatcatgttttcggaatacccga
gttgaggatctctgtctcgattttacactacctgggtaccctgattatgttctcactttt
gggcctgatcataaaatggtgaatatgaacaacttggaggattacgcagaacttgttgtg
gatgctacgatacatactggaatattcagacaaatggaagctttcaagtctggattttgt
caagttttccctattgaacatcttaagattttcactgaagaggagctcgagcgtttattc
tgtggagaacgtgactttttggcttttaatgaccttttggatcatatcaagtttgatcat
ggatacacagctagcagtcctcccattttgaacttattagaaataatacgggagtttgac
tacgatcagagacgggcttttctgcagtttgtgacgggtgcacctaggcttcctcctgga
ggtttggcatcactaaatccaaaattgacaatagtccgaaagcattgtagcaactgtgcc
catgcagatttacccagtgtgatgacatgtgccaattatcttaagctgccaccttattca
tcgaaagagatgatgaaagagaaactcctgtatgctataactgagggacagggctcattt
cacctctcatag

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