Citrus sinensis (Valencia orange): 102625215
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Entry
102625215 CDS
T02983
Name
(RefSeq) ruBisCO large subunit-binding protein subunit beta, chloroplastic
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
cit
Citrus sinensis (Valencia orange)
Pathway
cit03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cit00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
102625215
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cit03019
]
102625215
03110 Chaperones and folding catalysts [BR:
cit03110
]
102625215
03029 Mitochondrial biogenesis [BR:
cit03029
]
102625215
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cit04147
]
102625215
Enzymes [BR:
cit01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
102625215
Messenger RNA biogenesis [BR:
cit03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
102625215
Chaperones and folding catalysts [BR:
cit03110
]
Heat shock proteins
HSP60 / Chaperonin
102625215
Mitochondrial biogenesis [BR:
cit03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
102625215
Exosome [BR:
cit04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
102625215
Exosomal proteins of other body fluids (saliva and urine)
102625215
Exosomal proteins of breast cancer cells
102625215
Exosomal proteins of colorectal cancer cells
102625215
Exosomal proteins of bladder cancer cells
102625215
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
KH_PARP14_2
Motif
Other DBs
NCBI-GeneID:
102625215
NCBI-ProteinID:
XP_006488950
UniProt:
A0A067EHA8
LinkDB
All DBs
Position
2:join(201141..201377,201486..201611,201844..201981,202090..202185,202301..202543,202651..202885,203102..203271,203398..203475,203567..203638,203746..203850,203930..204022,204118..204210,204349..204475,204591..204604)
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AA seq
608 aa
AA seq
DB search
MASTFTAMSSISSMIAPNGRMTDKKLASSSNKLSSLASISSSSFGRRQSVALRRARTPKI
YAAKDLHFNKDGYAMKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGAPKIVNDGVTVAK
EVELEDPVENIGAKLVRQAAAKTNDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLITR
GIEKTSKALVSELKQMSKEVEDSELADVAAVSAGNNYEVGNMIAEAMSKVGRKGVVTLEE
GKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLLVDKKITNARDLINVLED
AIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLDDIAILTGGT
VIRDEVGLALDKVGKEVLGNASKVVLTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQD
YEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEGIVVGGGCTL
LRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKY
GYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMPAGNP
MDNSGYGY
NT seq
1827 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcgactttcactgccatgtcttccattagctccatgattgctcctaatggacga
atgactgataagaagcttgcatcttcttcgaacaaattgtcatcacttgcttccatttct
tcaagttcattcggcaggagacagagtgtagctctacgcagggcccgcacacctaagatt
tatgcggcaaaggacttgcatttcaacaaggatggatatgccatgaagaaacttcaaaat
ggtgtcaacaagcttgcagatctagttggagttacccttggtcccaagggcaggaatgtt
gttctagagagcaagtacggtgccccaaaaattgtgaatgatggtgtaactgtggccaaa
gaagttgagttagaggacccggttgagaacattggtgctaaattagtgagacaagcagct
gccaagactaatgacttggctggtgatggaacaacaacatctgttgttcttgcgcaaggg
cttatagctgaaggtgttaaggtcgtggcagctggtgcaaatcctgttcttatcacaaga
ggcattgagaagacatctaaggctcttgtttctgagctcaagcagatgtcaaaagaggtt
gaagatagtgaacttgccgatgtagcagctgttagtgcagggaacaactatgaagttggg
aatatgattgcagaagccatgagtaaagtgggacgtaagggtgtggtgacccttgaagag
ggaaaaagtgctgagaatatgctctatgttgttgagggaatgcaatttgatcgtggttat
atttctccctacttcgtcactgatagtgagaaaatggcagttgaatatgagaactgcaag
ttgcttcttgtggataaaaagattaccaatgcaagggaccttatcaacgttttggaagat
gcgattagaggtgcatacccaattttgattattgcagaagatattgagcaagaagcactg
gcaactcttgtcgtgaacaagctgagaggtgcattgaagattgctgctcttaaagctcct
ggttttggagagcgcaagagccagtaccttgacgacattgctattttgactggaggaact
gtaatcagagatgaggtgggacttgccttggacaaagttggcaaggaggtcctaggtaat
gcttctaaagttgtgctcacaaaggataccaccaccattgtgggggatggcagcacccag
gatgcagtgagcaaacgagtggcgcaaatcagaactctaattgagaacgctgagcaagac
tatgaaagggagaagcttaatgaaagaattgctaaactgtcaggtggtgttgctgtcata
caggttggagctcaaactgagacagagcttaaagagaagaagttgagagtcgaagatgct
cttaatgcaacaaaggctgcagttgaggaaggtatcgtagttggtggcggatgtactcta
ctgagactctcatctaaggtggatgccattaaggaaacccttgataatgatgaagaaaag
gttggagcagatattgttaaaagagctctgtgctacccactgaaattaattgccaaaaat
gccggtgttaatggaagtgtggtcagcgagaaggtgctttcaagtgacaatcataaatat
ggatacaatgctgcaactggaaactacgaagatctaatggctgcaggaattattgatcct
accaaggtggttagatgttgcttggagcatgcttcctcggtggcaaaaaccttcttgatg
tccgactgtgtggtggttgagatcaaggagcctgaacccgctatgcctgcgggtaaccct
atggacaactcaggatatggatactaa
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