KEGG   Citrus sinensis (Valencia orange): 102625218
Entry
102625218         CDS       T02983                                 
Name
(RefSeq) uncharacterized protein LOC102625218
  KO
K14772  U3 small nucleolar RNA-associated protein 20
Organism
cit  Citrus sinensis (Valencia orange)
Brite
KEGG Orthology (KO) [BR:cit00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:cit03009]
    102625218
Ribosome biogenesis [BR:cit03009]
 Eukaryotic type
  90S particles
   U3 small nucleolar RNA-associated proteins
    102625218
SSDB
Motif
Pfam: UTP20_N UTP20 UTP20_C HEAT HEAT_EF3_N
Other DBs
NCBI-GeneID: 102625218
NCBI-ProteinID: XP_006489855
LinkDB
Position
9:join(16453452..16453520,16453619..16453741,16453852..16454009,16454265..16454309,16455440..16455518,16455640..16455713,16456795..16456901,16457624..16457806,16458263..16458460,16458586..16458802,16458890..16458964,16459048..16459400,16459753..16459945,16460063..16460321,16460412..16460751,16460927..16461107,16461212..16461352,16461445..16461706,16461861..16462319,16462874..16463331,16464240..16464376,16464453..16464634,16464729..16465112,16465315..16465440,16465824..16465889,16465975..16467788,16467887..16468166,16468867..16469097,16469669..16470199,16470372..16470504,16470703..16470959)
AA seq 2704 aa
MATAEHAAAVKSLNKSPGRRRFVFKSFSQQIDDIEINVFRSLDKVKAEPSEGSSFLRDCL
IQWRELNTAEDFISFYEEIMPFVQTLPSIILHKELIFSKLISRLRFEARLSLEPILRLIA
ALSRDLLKDFLLFLPRIADSLVSLLESGADREPDIVEQIFTSWSFIMMYLQKYLIQDIIS
VLKITVKLRYYSKDYIQEFMAEATSFLLRNAPFKKLKAGIQKIMLEVVKKQSPARKSGVS
ALLYYVMRGTSSGVHSSAERVLKLLISQSVFSIGDKFNQGSDTIVEVLITAFQRICSNLG
SKEFMWENLYREIIDSVDNRCLFHLGCLLSLLIATVEIDNGQGVSDYQPVLELVDVLKRV
FITPSKNVKDVDHLFEVVDKVLQLMLCILNGLHGANDMDTITDCSSQWAPAFELKNSSSL
KFIGKLLQLDPCVVYTFRVNILSAINDMIENSQDEVICLLLSFFDKLQMEPECCNFLDGV
SEGRVLRIRGFLQEAVCSWISVINNVVAHGNSSSIEIDEAKLALLWGIVRCCPRIMDVQA
NSSLLMELIDALHRLSMDEAELFAGVSKHIWQSLIGASLSSYHELHCAKQSGLEETGKVL
HLAKTCKSSSQVLCAVADYLDYVHRTILPADNSHGKYHPELEAEKVEDAVVIYADNLCHS
DKAIRVSTLRILCHYEPLTYEDSTMDQPPEKKMKTETGVPHACPVDIHGCNVIHLLLSIE
ATPLSISTSRKLSLLISRIHMDLGAGRISETYIPLVLNGVLGIFHNRFSYLWNPASECLA
VLISKHVGFVWNKLVRYFQHCQSIFQISQDELDKPSFKLPDKSADLVECFNLFVSPASDS
TPHGTVLSLLLQSLQKVPSVVEAQSRQVIPLFLDFLAYNIDNLVSVGSFNSSICKGKEWK
SVLKEWLNLLKLMRNPKTFYKSQFLKDVLQNRLLDENDAEIQMKVLDCLLVWKDDFLIPY
HQHLRNLINSKSLREELTTWSLSRESHLIEDDHRSNLLPLVIRLLMPKVRKLKTLASRKH
ASIYHRKAVLCFVAQLDVDELPLFFALLIKSLEIIPKGADDGAFWEKPYCNMEEFQEYSF
LKFFTIENLASLSWKKSHGFLHVIEDVIRVFDELHVGPFLNLLIGCVVRVLASCTSSLEF
LKGCGSSVVENHANTDSTLLAKDNLAGKNQGQISSAMKQLKDIRSLCLRILSTVLNKYVD
HDYDCDFWDLFFQSVKPLIDAFKQEGSSSEKPSSLFSCFLAMSRSHRLISLLEREENLIP
DIFSILTVMTASEAIVSSVLKFIENLLNLDNEVDGEYSAIKKVLLPNVATLISSLHFLFQ
CAAKRKLVKYSGETVIRILQLLSQYIKDPLEAGKFLDILLPFLAKGVKDSEVVVKVLHVL
RDIIPVAGTGSTKKVLNALSPLLASVELDMRSSICDLLDSLAKADPSVFPVAKLVSELNA
TSAVEMGGLDYDSIVTAYDKIGIDLFHTIEVDHSLVILSHCVRDMSSDEMILRHSAYRSL
LSFVEFSSLILNRERCNTHEVMQAVDDSLWTIGSIQRIINKFILKRMGEAMTRGSSVKKE
WVDLLREMVLKLPQLSNLNSLKDLCSGDTEVDFFNNIIHLQKHRRARALTRFRKVVSTSN
ISEGLVNKVFVPLFFNMLFDVQDENVRSACSEALASISAHMKWKSYSALLMRCFQEMEKN
PQKQKILLRLFCSIFDEFHFSQLCSSQEANDPSTNALDANLDNNSSSIILQNCHNSMTIT
EIKTCLNDTMLPKLQKLLYADSEKANVDISRAVLKVLKLLPGDIMDSQLPSIIHRISNFL
KSRSDGIRNSARIALADCLKELGLEYLQFIVRVLRSILKRGYELHVMGYTLNFILSKSLS
RSTSCKLDYCLEELLSVVGNDILGDVAEQKEVEKIASKMIETRKQKSFETLELIAQNITF
RSHASKLLSVVTAHLQNHLTPKVKSKLESMLNHIAAGIERNPSVDQTDLFVFIYDLVQKR
IEEENDLHANSSSKGANNYKNDVRGKTISSGRVIVAKSTCSHLITVFALGLLHKHLKNLK
LKKHDEELLSKLDSFMTILGNCLSSKYEDILSASLRCLAPLISLPLPSLKSQADKMKATL
LDIAHSSATSSSLLMQSCLNLLTKLLRTTDITLSSDQLHELIQFPLFVDLERNPSDLALS
LLKAIVNRKLVVPEIYDVVIQVAELMVTSQEESIRKKCSHILLQFLLDYQLSDKRLQQHL
DFLLANLSYKHPSGREAVLEMLHVIIKKFPQTKLDEQSNTLFLHLVFRLVNDPDNTVRLM
IGVALKLLVGRISPHSLYSILEYSLSWYLDGMQQLQSAGAQVLGLLVEVMKKDFQEHIDI
VLQEAISILQSTKNIVEQQLDLPDETTIPFWKDAYYSLVLLEKILCHFPDILLDTRLENL
WEAICELLLHPHTWLRNISNRLIAMYFAAVTEARREDGEKSFGDFFLIKPSRVFMIAVSL
CCQLETQDSFEDAFSNHITENLVSAICNMHSFRGYMECADFQNFWSNLGQHEQGLFLRAF
QLLDLRKGRGLFLSIISGAGDQNDCLASGDFQYLLVSNLLKKMGKIALQKDATIQMKIIF
NTFRLISSKISQDYLQRYVVHMLPSLYKVCEGFAGKNIPDDLKQLAKEVSDSIRDTLGGQ
IFVQVYNEIRKNLKAKRDKRKQEDKRMAVVNPMRNAKRKLRVAAKHRANKKRKIMTMGMG
RWLR
NT seq 8115 nt   +upstreamnt  +downstreamnt
atggcgacggcagaacacgctgcggccgtcaagtctctcaacaagtcccccggccgtcgc
cgcttcgtctttaagagtttctctcaacaaatagatgacatcgaaatcaatgtattcaga
agccttgataaggttaaagccgagccatcggagggctcctcatttttgcgcgattgcctc
attcaatggagagaattaaatactgcagaggattttatttccttttacgaggaaattatg
ccttttgtacagactctgccttcaataatattgcacaaggaattaatattctcaaaactt
atttcgagattacgttttgaagcaagactatcacttgagcctattctcaggctgattgca
gctttatcaagggatctccttaaggattttttactttttttgcctaggattgctgattct
ctggtttctctcctggaaagtggtgctgatagggagccagatattgttgagcagattttt
acttcttggtcatttatcatgatgtatttgcagaaatatcttattcaagatataataagt
gttctcaagatcacggtaaaactaagatattactcaaaggattatatccaggaatttatg
gctgaggctacatcattcttgctgaggaatgcaccttttaagaagcttaaagcaggtatc
caaaagatcatgttagaggttgtgaagaaacaatcacctgcccgaaaatctggagtcagt
gctttgctttattatgttatgagaggaacatcatcaggggttcattcaagcgcagagcga
gttttgaagttattgattagccagtctgtattttctattggtgataagttcaatcaaggt
tcagacactattgttgaagttctgatcacagcttttcagagaatatgttctaatctggga
tcaaaggagtttatgtgggaaaacttatatcgagaaataattgactctgtagataataga
tgcctttttcatcttggttgccttttgtcactgcttattgctacggttgaaattgataat
ggtcaaggagtttctgattatcaaccagtgcttgaactcgtggatgttcttaaacgtgtg
tttatcacgccttccaagaatgttaaggatgtagatcatttatttgaagttgttgataag
gttctgcaactaatgctgtgcattctcaatgggcttcatggagcaaatgatatggacact
atcacagactgttcttcgcaatgggctcctgcatttgagttgaagaattcaagttcgttg
aaatttattggaaagctactacaattggacccttgcgtagtctatacatttagagtgaat
atattaagtgcaataaatgatatgatagaaaattcacaggacgaagttatttgtctactg
ttgtccttctttgacaaactgcaaatggaacctgagtgctgtaacttcttagatggagta
tcagaaggacgagtcttgaggattcgcggtttcttgcaggaggctgtctgctcttggatc
agcgtgataaataatgttgttgctcatggaaattcatcatctattgaaattgatgaggct
aaattggctctgctttggggaattgtcagatgctgtcctcgtataatggatgtgcaagca
aactcatcgttgctgatggagctgatagatgcacttcatcggctttcaatggatgaagct
gaactttttgcaggtgtttctaagcacatatggcaaagcctaattggagcttctttatct
tcctatcatgaattgcattgtgcgaagcaatctggacttgaagaaacaggcaaagttctt
catcttgctaaaacctgcaaatcatcctcacaagtattgtgtgctgttgctgattattta
gattatgtgcatagaactatattgccagcagacaatagccatggaaaataccacccagag
ctagaagcagaaaaggttgaggacgcagttgtcatatatgcagataatttgtgccactca
gacaaggcaatccgtgtttcaactcttagaatcttgtgtcactacgaacctttaacttat
gaagactctacgatggatcaaccgcctgagaagaaaatgaaaactgaaactggtgttcct
catgcttgccctgtggatattcatggctgtaatgttattcatctgcttctctccattgag
gcaacacctctttcaatatctacaagcaggaagttatccctactcatctctagaatacat
atggacctaggcgctggaaggatatctgaaacttatataccccttgtgttgaatggggtt
cttggtatcttccataatcgttttagctatctgtggaatccagcatctgagtgccttgca
gttctgattagcaagcatgttggatttgtgtggaataaacttgttcgttactttcaacat
tgtcaatccatttttcagatatctcaagatgaacttgacaagccgagttttaagttgcct
gacaagtctgctgatctggtcgagtgttttaatttgtttgtttctccggcgtctgatagc
accccacatggaacagtgttgtctctgttgcttcagtccttgcaaaaagttccttctgtt
gttgaggctcagtctcgacaagttatacctctgttcttggactttttggcctacaatatt
gacaatcttgtaagtgtgggatcattcaattcaagtatttgcaaaggcaaagagtggaag
agtgtccttaaagaatggctgaacttgttgaaactgatgcgaaaccccaagactttttat
aaaagtcaatttttaaaggatgttctacaaaataggcttctggatgaaaatgatgctgaa
atacagatgaaggttcttgattgccttttggtgtggaaagatgatttcttaatcccttat
catcagcatttaagaaacttgatcaattcaaaaagtttgagagaagaactgacaacatgg
agtttatctagagaatcacatctaattgaagatgatcacagatctaatcttctgcctttg
gttattcgtctcttgatgccaaaagtcagaaaattgaagacgcttgcctctcgaaagcat
gcaagtatatatcatcgaaaggcggttctgtgtttcgtagctcaactagatgttgatgaa
ctccctctcttctttgcattgttaataaagtccctggaaattattcccaagggagctgat
gatggagcattttgggaaaaaccctattgcaatatggaggaatttcaagaatatagtttc
ttgaagtttttcaccatagaaaacttagcatctctgtcgtggaaaaagagtcatggtttt
ctgcatgtaattgaagacgttattcgagtttttgatgaattacatgttgggccttttctt
aatttactgattggatgtgttgttcgggtattggcaagctgcacttcaagtcttgaattt
ttaaaaggttgcggatcttctgtagtggaaaatcatgcaaatactgactcaactttactg
gcgaaagacaatcttgcaggaaaaaatcagggccagatcagttcagccatgaagcagctc
aaggatataagatctttatgtctgagaatactttccactgttcttaataagtatgtggat
catgattatgattgtgatttctgggacctgttctttcagtcggtgaaacctttgatcgat
gctttcaagcaggagggttctagtagtgagaaaccaagttcactgttctcttgctttttg
gccatgagcagaagccacaggctcatatctctattagaaagggaagaaaatctgatccct
gatatattttcaattttaactgtcatgactgcctctgaagcaattgtatcaagtgttctg
aagttcattgagaacctgttgaatcttgataatgaggtggatggtgaatacagtgctatt
aaaaaagttctactgccaaatgttgcaacacttatcagcagcttgcattttctctttcag
tgtgcagccaagaggaaattggtcaaatactctggggagactgtgattagaattttgcaa
ttgttatcccagtatattaaagatccattggaagctgggaagtttttggatatcttgcta
cccttcttagcaaagggagttaaagattcagaagtcgtagtgaaagttctgcatgttctt
cgtgatatcataccagtagcagggactgggagtactaaaaaagttctcaatgcactttct
ccacttcttgcttctgtcgagttggatatgcggtcttctatctgtgatcttcttgattct
ctcgcaaaagctgacccttctgtgttccctgtggcaaaacttgtctctgagttgaatgca
acctctgctgtagaaatgggtggccttgattatgattctatagttacagcatatgacaag
attggcattgatttattccatactatagaagttgaccactcattagtcattttgtcacac
tgtgtgcgcgatatgtcatcagacgaaatgatcctgaggcatagtgcatatcgatcactt
ctctcatttgttgaattttcttctctaattctcaatagagaaaggtgcaatacacatgaa
gtgatgcaagcagttgatgacagtttgtggacaataggatccattcagcgcataataaac
aagtttatcttgaagcgtatgggtgaggcaatgaccagaggaagtagcgtgaaaaaggaa
tgggttgatttactgagagagatggtgttgaagctcccacaattatcaaatcttaattca
ctgaaagacctgtgctctggggatactgaagtagattttttcaataatattattcacttg
cagaaacataggagagcacgagcactgacgcgttttaggaaagttgttagtacaagcaac
atatcagagggacttgtgaataaagtgtttgtcccactatttttcaacatgttgtttgat
gtacaagacgaaaatgttagaagtgcatgctctgaagctcttgcttcaatttccgctcat
atgaaatggaagtcatactctgctttgttgatgagatgctttcaggagatggaaaagaat
ccacagaagcaaaagattttgctgaggctattttgctctatttttgatgagttccatttt
tctcaactttgttccagccaagaagccaatgacccttcgactaatgctttagatgctaac
cttgataataatagttcttcaattatattgcaaaattgtcataattctatgacgatcaca
gagataaagacatgccttaatgacactatgctcccaaagttgcaaaagctactgtatgct
gattctgagaaggccaatgttgacatcagtcgagctgtgttgaaagtactgaagttgctt
ccaggagacataatggactcacaacttccgagtatcattcatcgcatttcaaacttctta
aagagtcgttcggatggcattcgcaatagtgctaggatagctttagctgattgtttgaag
gagcttgggctggaatacttgcagtttatcgtacgggttttgcgatctatcttgaagcgg
ggctatgagctgcatgtgatgggatacacgctcaactttattttgtcaaaatctctttca
agatccaccagctgtaagttggattattgtttggaagaactgctatctgtagtggggaat
gatattcttggagatgttgctgaacagaaagaggtggaaaaaattgcttctaaaatgatt
gaaactaggaaacaaaaatcttttgagactctggaattgattgcccagaacataacattt
cgaagtcatgcctcaaaacttctctctgttgtaactgctcatttacagaatcatctgaca
ccaaaagtgaagtcaaaattggaaagcatgctaaatcacattgctgctggtattgaacgc
aacccctcagtggaccaaactgacctatttgtcttcatatatgaccttgttcaaaaaaga
attgaggaagaaaatgatctgcatgcaaattcttctagtaaaggagccaacaattataaa
aatgatgtgagagggaaaaccatttcttcagggcgggtaatcgttgctaaatcaacatgt
tcacatcttataacagtgtttgctcttggactactgcacaaacatttaaagaatttgaaa
ttgaagaaacatgatgaagaactgttatcaaagttggattcctttatgacaatactgggc
aattgcttgagttccaagtatgaagatattttgtcagcatcccttagatgtcttgcccca
ttaataagtctgccactgccgtctctcaaatcccaagctgataagatgaaggctactctg
ttggatatcgcccacagttcagcaacttccagcagtctgttaatgcagtcatgtctaaat
ttgttgactaagcttctgcgcaccactgatattaccctttcttcagatcaactgcatgag
ttaattcaatttcctttgtttgttgatcttgaaaggaatccctctgatttagctctttca
cttctaaaggcgattgttaatcgcaagctagtcgttcctgagatatatgatgttgtaatt
caagttgcagagctgatggtaacaagtcaagaagaatcaattcgcaagaaatgcagccat
attttgttgcaattcttgcttgattatcaactttcagataaacggttgcaacaacatttg
gattttctgctggcaaatctgagttataagcatccaagtggaagggaagccgtgcttgaa
atgctacatgtaattataaagaaatttccacaaactaaattggatgagcaatctaacacg
ttatttctccatttggtgttccgtttggttaatgaccctgataatacagtccggttaatg
attggtgtagctctaaaactgcttgtcggacgcataagtccacattcgctatattccata
ctggagtacagtctatcttggtatttagacggaatgcagcaactccagagtgctggtgca
caggtcttgggattgctggttgaagttatgaagaaagactttcaggagcatattgatatt
gtattgcaagaggcaataagcattttacagtccactaaaaatattgtggaacagcaactg
gatcttcctgatgagaccaccattcccttctggaaagatgcgtactattcactagttctg
ttggagaagatcctctgtcacttccctgatattttgctggatacgcgtctggagaattta
tgggaagcaatttgtgagttgttgttgcacccccatacatggttgcgtaatatatcaaat
cgccttatagccatgtattttgctgctgttactgaagctcgcagggaagacggcgagaag
tcatttggagatttcttcctgattaagccaagtagagtctttatgatagctgtttcacta
tgctgtcagctagagacccaagattcttttgaagatgctttcagcaaccatattaccgag
aatcttgtgtctgcaatctgtaatatgcattctttcagaggatatatggaatgtgcagat
tttcaaaacttctggtctaaccttggacaacatgagcagggtctatttcttagagctttt
cagttgcttgacttgagaaaaggaagaggattgtttctatctattatctctggagcaggt
gaccaaaatgattgtcttgcctctggtgatttccagtatttgctcgtctccaatttgctc
aaaaagatgggaaagattgctcttcaaaaggatgctactattcagatgaaaatcatcttc
aacacttttaggctcatttcatcaaaaattagtcaggactacttgcagcgctacgtggtt
catatgctgccatcattgtataaagtttgtgaaggatttgcggggaagaatatccctgat
gatctaaagcaattagcaaaagaagtaagcgatagcatacgggatacattaggcggccag
atttttgtacaggtctataatgagatcagaaagaatctcaaggcaaaaagggataagagg
aaacaagaggacaagcgtatggcagtagtcaacccaatgcggaatgccaagaggaagttg
agagttgctgccaagcatcgtgccaacaagaagaggaagattatgacaatgggaatgggg
agatggttacgttag

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