KEGG   Citrus sinensis (Valencia orange): 102625238
Entry
102625238         CDS       T02983                                 
Name
(RefSeq) serine/threonine protein phosphatase 2A regulatory subunit B''beta-like
  KO
K11583  serine/threonine-protein phosphatase 2A regulatory subunit B''
Organism
cit  Citrus sinensis (Valencia orange)
Pathway
cit03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:cit00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    102625238
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:cit01009]
    102625238
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cit03019]
    102625238
   03036 Chromosome and associated proteins [BR:cit03036]
    102625238
Protein phosphatases and associated proteins [BR:cit01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-2 (PP2A)
    Regulatory subunits
     102625238
Messenger RNA biogenesis [BR:cit03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Surveillance factors
    Protein phosphatase 2A
     102625238
Chromosome and associated proteins [BR:cit03036]
 Eukaryotic type
  Centromeric chromatin formation proteins
   Other centromeric chromatin formation proteins
    PP2A (protein phosphatase 2A)
     102625238
SSDB
Motif
Pfam: EF-hand_13 EF-hand_7 EF-hand_6 EF-hand_1 EF-hand_8 EF-hand_5 P2R3B_EF-hand DUF4187
Other DBs
NCBI-GeneID: 102625238
NCBI-ProteinID: XP_006470928
LinkDB
Position
8:complement(join(20196486..20196626,20196737..20196862,20197327..20197483,20198131..20198240,20198377..20198524,20198623..20198764,20199114..20199204,20199444..20199549,20200316..20200415,20200494..20200599,20200808..20201044,20202398..20202553))
AA seq 539 aa
MTNMESVAGDVACLDAELLQLQELSPLAFKSNPDFGQKLFDQWLSLPEANKLVTSLLNDA
KAGPLNVSANSSSSNAATNSLPSLFPAGSAPPLSPRSTSGSPRVMKQRAGPSNLGSPLKV
VSEPAKELIPQFYFQNGRPLPNELKEQCLFRINQFFYGHSDGLQIQEFKLVTKEICKLPS
FFSTALFRKIDVNNTGLVTRDAFVDYWVNGSMLTMDTATQIFSILNQPDLKYLTQEDFKP
VLRELLATHPGLEFLQSTPEFQERYAETVIYRIFYYINRSGNGHLSLRELKRGNLIDAMQ
HADEEEDINKVLRYFSYEHFYVIYCKFWELDTDHDFLIDKENLIRYGNHALTYRIVDRIF
SQVPRKFTSKVEGKMGYEDFVYFILSEEDKSSEPSLEYWFKCIDLDGNGVITRNEMQFFY
EEQLHRMECMAQEPVLFEDILCQIIDMIGPENQSYITLRDLKGCKLSGSVFNILFNLNKF
MAFETRDPFLIRQERENPTLTEWDRFAHREYIRLSMEEDVEDASNGSAEVWDESLEAPF
NT seq 1620 nt   +upstreamnt  +downstreamnt
atgacgaacatggaaagtgttgccggagatgtggcgtgtttggatgcggagttattgcaa
ttacaggagttatctcccttggcgttcaaatcgaacccggactttgggcagaagctcttt
gatcagtggctttcgcttcctgaagctaataaactggtgacatcattgcttaatgacgca
aaggctggtcccttgaatgtgtctgcaaactcttctagttcaaatgctgccacgaattca
ttaccgtctttgtttccggctggcagtgcacctccactctcaccaaggagcacatctggc
tcacctcgtgtgatgaaacagagggctggcccttcaaatttaggttctccgctgaaagta
gttagtgagccagcaaaagaattgatacctcagttttactttcagaatggacgtcctctt
ccaaatgagctaaaagaacaatgtttatttcgaattaatcagtttttttatggtcactcg
gatggactgcaaatacaagaattcaaattagttactaaggaaatctgcaagttaccgtct
ttcttctctacggctcttttcagaaagattgacgttaataacacgggtcttgtgacaagg
gatgcttttgttgattattgggtcaatggaagcatgttgacaatggatacggcaacccag
atcttctcgatcctaaatcagccagatctcaagtacctcactcaggaggattttaaacct
gtacttagagaactgttggccactcatccagggttggagttcttacagagcacgcccgag
tttcaggaaagatatgctgaaactgtaatataccgaatattttactacataaatagatct
gggaatggtcatctgtccctcagggagctgaaacgtggcaacttaattgatgcaatgcaa
catgcggacgaagaagaggacatcaacaaagttttaaggtacttctcgtatgagcatttt
tatgtcatatactgcaagttttgggagctagatacggaccatgatttcttgattgacaag
gagaacctcattagatatggtaaccatgcgcttacgtacaggattgttgatagaatattt
tctcaggttcctagaaagttcactagtaaggttgaagggaagatggggtatgaagacttt
gtctacttcatactgtctgaggaggataagtcatctgagcctagtcttgaatattggttc
aagtgtatagatttggatggaaatggagttatcacccggaatgaaatgcaattcttttat
gaagagcagttgcatcgaatggaatgtatggcccaagagcctgtgctctttgaggatata
ttgtgtcagataattgacatgattggaccagagaatcagagctatattacgctgcgtgac
ttgaaaggttgtaaactttcaggaagcgttttcaatatacttttcaacctcaataaattt
atggcctttgaaactcgtgacccatttcttattcgtcaggagcgagagaacccaacactg
acagaatgggatcgctttgcgcatagagaatacattaggctctcaatggaagaagatgtt
gaagatgcctccaatggaagtgcagaagtgtgggatgagtcccttgaggctcctttctga

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