KEGG   Citrus sinensis (Valencia orange): 102625247
Entry
102625247         CDS       T02983                                 
Name
(RefSeq) protein HASTY 1 isoform X2
  KO
K14289  exportin-5
Organism
cit  Citrus sinensis (Valencia orange)
Pathway
cit03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:cit00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    102625247
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:cit03016]
    102625247
   03036 Chromosome and associated proteins [BR:cit03036]
    102625247
Transfer RNA biogenesis [BR:cit03016]
 Eukaryotic type
  tRNA transport factors
   tRNA export factors
    102625247
Chromosome and associated proteins [BR:cit03036]
 Eukaryotic type
  Gene silencing
   microRNA pathway
    Other miRNA pathway proteins
     102625247
SSDB
Motif
Pfam: Exportin-5 Xpo1
Other DBs
NCBI-GeneID: 102625247
NCBI-ProteinID: XP_006471793
LinkDB
Position
5:complement(join(25051697..25051776,25051950..25052133,25052307..25052601,25052720..25053223,25053688..25053932,25054077..25054371,25054458..25054561,25055031..25055132,25055255..25055424,25055517..25055643,25055751..25055864,25056490..25056765,25056857..25056919,25057663..25057900,25057994..25058065,25058154..25058317,25058392..25058462,25059117..25059186,25059285..25059365,25059461..25059604,25060160..25060261,25061010..25061120))
AA seq 1203 aa
MEDTNNPASNVARAIAAALDWNSAPEARKAAVSYLESVKTGDIRFLASTSFLLVKKNWSS
EIRLHAFKMLQHLVRLRWDELNPTERGDFANVAVDLMSEIADPCEEWALKSQTAALVAEI
VRREGINLWQELFPSLVSLSSKGPIQAELVSMMLRWLPEDITVHNEDLEGDRRRLLLRGL
TQSLPEILPLLYSLLERHFGAALSEVSRQQLDVAKQHAATVTATLNAINAYAEWAPLPDL
AKYGIIHGCGFLLSSLDFRLHACEFFKLVSPRKGPADASASEFESAMHDVFQILMKVSGE
FLYRSGTSAGAIDESEFEFAEYICESMVSLGTSNLHCIVREDTILSMYLQQMLGYFQHFK
IALHFQSLLFWLALMRDLMSKTKVAHSTGDGSTVNNADSGSGKVDSRKMRILSFLNDDIC
GAILDISFQRLVKREKAPGTQGPLELWSDDFEGKGDFSQYRSRLLELVKFVASNKPLVAG
VKVSERVMAIINSLLISTMPAQDLAVMESMQSALENVVSAVFDGSNQFGGANSEVQLSLS
RIFEGLLRQLLSLKWTEPPLVVALGHYLDALGPFLKYYPDAVGGVISKLFELLTSLPFVF
KDPSTNSARHARLQICTSFIRIAKTSDKSILPHMKDIADTMAYLQREGRLLRGEHNLLGE
AFLVMASAAGIQQQQEVLAWLLEPLSQQWMQLEWQNNYLSEPLGLVRLCSDTSFMWSLFH
TVTFFERALKRSGIRKANLNLQSSSAENTAVIHPMASHLSWMLPPLLKLLRAIHSIWSPS
ISQLLPGEIKAAMTMSDAEQFSLLGEGNPKFSRGAVAFADGSQLDTSKEGYGEPNESDIR
NWLKGVRDSGYNVLGLSATVGDPFFKSLDSGSVVVALMENIQSMEFRHIRQLVHSVLIHM
VKFCPPDMWEVWLEKLLNPLFIHCQQVLSSSWSSLMHEGRAKVPDIHGIVAGSDLKVEVM
EEKLLRDLTREICSLLSTMASSGLNNGIPPIEQSGHFNRVDVLFLKDLDAFASKSMVGFL
LKHKDLALPALQISLEAFTWTDGEAVTKVSSFCSAVVLLAIQSNNIELQQFVSKDLFSAI
IRGLALESNAVISADLVGLCREIFIYMCDRDPAPRQVLLSLPCITPQDLLAFEDALTKTA
SPREQKQHMRSLLVSGTGNNLKALAAQKSVNVITNVSTRPRSSDNAPENRTEEGESIGLA
AIS
NT seq 3612 nt   +upstreamnt  +downstreamnt
atggaggataccaataacccagcaagcaatgtggctcgggccattgctgctgcgcttgac
tggaactctgctcctgaagctcgcaaagccgctgtctcttatcttgaatccgtgaaaact
ggagatatacggtttttggcaagtacatctttccttctggtcaaaaagaattggtcttct
gaaatccgattacatgcatttaaaatgctccagcatttggtcagattaaggtgggatgaa
ttgaatcctacagaacgtggggactttgcaaatgtcgcagttgatttgatgtctgagatt
gcagatccttgtgaagaatgggctttgaaaagtcagacagctgcccttgttgcagagata
gttagaagagaaggcataaatctttggcaagagctgtttccttctctagtttccctgtcc
agcaagggtccaattcaggctgagttggtttccatgatgctaaggtggcttcctgaagat
attactgtccacaatgaagatttggaaggtgatcgacgtaggctactgttgcgaggcctt
actcaatccttgcccgaaattttgcctttactgtacagtttactagaaaggcattttgga
gctgcattaagtgaagttagtaggcaacagttggacgttgcaaaacaacatgcagctaca
gtaactgctactttaaatgctataaatgcatatgctgagtgggctcctttgcctgatctc
gctaaatatggtatcattcatggttgtggtttcttgctttcatcactagacttccgtctt
catgcttgcgagtttttcaaactcgtctcgccaagaaagggacctgctgatgcctccgca
tctgagtttgagtctgctatgcatgatgtctttcagatcctgatgaaagtctccggagaa
tttttgtacagatctgggacaagtgctggagctatagatgaaagtgagtttgagtttgct
gaatatatatgcgagagcatggtgtctttgggtacttcaaacttgcattgtattgtgagg
gaagacaccatactgtcgatgtacctacagcagatgctgggctactttcaacatttcaag
atagcccttcattttcaatcgttgttgttttggctggcactaatgagagatttgatgtca
aagacaaaagttgcacattcaactggagatggatcgactgttaataatgcggactctggt
tctgggaaggttgatagtcgaaagatgaggattttaagttttttgaatgatgatatatgt
ggtgcaattcttgatatatctttccagcgcttagtcaagagagagaaagctcctggaaca
caagggcctttggagttgtggagtgatgattttgaaggcaagggtgatttcagccagtat
cgatctaggctgttggagctggtcaaatttgttgcttctaacaagcccctcgtagctggt
gttaaagtatctgaaagagttatggcaatcattaatagtctcttgatttctacaatgcct
gctcaggatttagctgtaatggaaagcatgcaatcagctctagaaaatgttgtcagtgca
gtttttgatgggtcaaatcaatttggtggggccaattctgaggttcaactttcgctgtcc
agaatatttgaaggtttacttcgtcaacttctttctctgaaatggactgagccacccctt
gtcgtcgctctagggcactatttagatgcattgggtccctttttgaaatactatcctgat
gctgtcggtggtgtcatcagcaaattatttgagcttctaacctcacttccttttgttttc
aaggatccttcaacgaatagtgcacgacatgcaaggttacagatatgtacatcatttatt
agaatagccaaaacatctgataaaagcatcctacctcatatgaaggatattgctgacact
atggcttatttgcaaagagaaggtcgtttacttcgtggtgaacataatcttctaggtgaa
gcatttcttgttatggcttctgctgctgggattcaacagcaacaagaagttttggcctgg
ttacttgaacctttgagccaacaatggatgcagcttgagtggcaaaataattatttgtct
gaaccacttggacttgtccgtttgtgctctgatacttcatttatgtggtcactttttcac
accgtgacattctttgaaagggcactcaagagaagtggaattagaaaagccaatttgaat
ttacagagcagctctgcagaaaatactgctgttatccatccaatggcttcccatctttca
tggatgctacctcctctcctaaaactgcttcgcgctatacattccatctggtctccatct
atatcacaattattgcctggagagataaaagcagctatgaccatgagcgatgctgagcag
ttcagtcttcttggggaaggtaacccaaaattttcaaggggtgcagtagcttttgcagat
ggttcccagttggacacaagtaaggaaggatatggagagcctaatgaatctgatatacgt
aattggttaaaaggtgtcagagatagtgggtacaatgtacttggactatcagcaaccgtt
ggagatccattttttaaatctttggactccggttcagttgtcgtggcactgatggagaac
atacagtcgatggagttcaggcatataaggcagcttgttcattcagttttaatccatatg
gttaaattttgccccccagatatgtgggaggtctggctggaaaagctcctgaacccatta
tttatccactgtcaacaagttcttagcagctcttggtccagtcttatgcatgaaggtcga
gcaaaggttccagatatccatggcatagttgctgggtctgacttgaaagtagaagtaatg
gaagagaaactgcttcgggatctgactcgtgagatatgttcacttctctctactatggcc
tcatcaggattaaataatgggattcctccaatagaacagtcagggcattttaaccgtgtg
gacgttttgtttctgaaagatctagacgctttcgcatcaaaatctatggttggtttcctc
ttgaagcacaaagaccttgcccttccagcattgcagatttctttagaagctttcacgtgg
acagacggtgaagctgtgacaaaagtttcttccttttgttctgctgtggttcttctagcg
atacaatcaaataatatagaactccagcagtttgtttcgaaagatctgttttctgctatt
atccgaggtctcgcccttgagtcaaatgctgttattagtgctgatctggttggtctttgt
cgtgagatattcatatatatgtgtgatagagatcctgctccgagacaggttctactctct
ctcccttgtattaccccacaagatttgctagcttttgaagatgctttaacaaagacagct
agtcctagggaacaaaagcaacatatgaggagcttgcttgtatcaggtactgggaacaat
ttgaaagctcttgctgctcagaaaagtgttaatgttatcacaaatgtttcaacaaggcca
cgcagctcagataatgccccagaaaatagaactgaagagggggaatctattggattggcg
gccatttcgtga

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