Citrus sinensis (Valencia orange): 102625289
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Entry
102625289 CDS
T02983
Name
(RefSeq) protein CHROMATIN REMODELING 35
KO
K10875
DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
Organism
cit
Citrus sinensis (Valencia orange)
Pathway
cit03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cit00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
102625289
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cit03400
]
102625289
DNA repair and recombination proteins [BR:
cit03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
102625289
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DEAD
Helicase_C_2
AAA_16
zf-CCHC_2
Motif
Other DBs
NCBI-GeneID:
102625289
NCBI-ProteinID:
XP_006487355
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All DBs
Position
8:join(5886498..5886546,5886950..5887452,5887754..5887942,5888481..5888639,5890319..5892093,5892188..5892191)
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AA seq
892 aa
AA seq
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MEPAVMVLPLNYASPDEIYLKRHKRMKMSSDVESYSSTTPSTSVKHDMKVKTDTFDYSDP
FSIKDLLDDLSSGKYGSVTKEIKELIDRKVQIFGPLLSQNPSLSSMFVDAEKLSGQALKS
ANRQAHHSVIDLEEDCVAVGVPSKSPAVVVLSDDEDEGDKRPSYPFQEVRLMQPPVGPFL
TEIQVRGNVDNMVRIEEQVRLAGETVVEKDKGVYVGVEGDDDNQKKAEDDGLGDIWQEMS
MAMEISKDVAEDNSSAEHMGEDADDCDHSFVLKDDLGYVCRICGVIDRGIETIIDVQFNK
VKRSNRTYLSDFRSAKDRESIDVGVKLSEYELMVTEIAAHPRHTKVMKPHQVEGFNFLRR
NLVTDNPGGCILAHAPGSGKTFMIISFIQSFLAKYPQARPLVVLPKGILATWKKEFQRWQ
VEDIPLLDFYTVKADGRAQQLEVLKKWVEEKSILFLGYKQFSAIICDTETSKISATCQEI
LLKQPSILILDEGHTPRNENTDVLQSLAKVQTPRKVVLSGTLYQNHVKEVFNILKLVCPK
FLKMDTSRSVVKRIMSRVQISGLKKQIKTNAQDTFYELVEHSLQSDEDFQRKVTVIKDLR
EMTSGVLHYYKGDFLDELPGLVDFTVVLNLSSRQKSETQKLKKWSRKMKIAAAGSATYLH
PKLATYLHPKMNSLSEKSAPTDDKMDELLERLDIKDGVKAKFFLNMLNLCEASGERLLVF
SQYLLPLKFVERLAAKMKGWTLGREIFVISGESNADEREWAMDQFNNSPHSKVFLGSIKA
CGEGISLVGASRIIILDVPFNPSVTRQAIGRAFRPGQTKKVYAYRLVAAESPEEEDHATC
LKKELISRMWFEWNEYCGYKNFQVETVDVNDCGDLFLESQLLKEDVRVLYRR
NT seq
2679 nt
NT seq
+upstream
nt +downstream
nt
atggagcccgcagtgatggttttgccgctaaattacgcttctcctgatgaaatatatttg
aagagacataaaagaatgaaaatgtcgagtgatgtggaaagctacagcagtacaactccc
tccacaagtgtgaaacatgatatgaaagtgaagacagatacttttgattattccgatcca
ttttccatcaaggatttgctggacgacttgagctctggtaaatatggaagcgtgaccaaa
gaaataaaggaacttattgatcggaaggtccagatatttggtccacttctctcgcagaat
ccttcactgtcgagtatgtttgtggatgctgaaaagctgagtggacaagctttgaaatca
gcaaatcgacaagcgcaccattccgtcattgatttggaggaagattgtgtggctgttggt
gttccatcaaaatcaccagctgtcgtggttctttcagatgatgaagatgaaggggacaag
aggccttcttatccttttcaagaggtccgcttgatgcagccacctgttggaccattttta
acagaaatacaggttcgaggcaatgtggacaatatggtacgaatagaagaacaggtaaga
ttggctggtgaaactgtggttgagaaggataaaggtgtctatgttggtgtggaaggagat
gatgacaaccaaaaaaaggctgaagacgacggtcttggtgatatttggcaagagatgtca
atggcaatggaaatttccaaggatgtggctgaagataattcatctgctgagcacatggga
gaagatgcggatgactgtgatcattcatttgtcttgaaggatgatcttggttatgtctgt
cgcatctgtggagttatagatagaggaattgagaccataattgatgtccaattcaataag
gtgaaaaggagcaatagaacttacctatctgattttcggagtgctaaagatagagaatca
attgatgttggagttaagctgtctgagtatgagttgatggtgactgagattgctgctcat
ccaaggcatacgaaggtcatgaaacctcatcaggtggaaggctttaactttcttcgtaga
aatttggtgacagataatcctggtggctgcatattagcccatgctcctggatctggaaag
acatttatgataatcagtttcattcaaagtttcttagccaaatatccacaggctagacca
ctggttgtgcttcctaaaggaatcttggctacatggaagaaggagtttcaaagatggcaa
gtggaagatattcctctattagatttttacactgtaaaagctgatggtcgggctcagcaa
ttggaggtgctgaaaaagtgggttgaggaaaagagtatacttttcttggggtacaaacag
ttctccgctattatttgtgacactgaaaccagcaagatttcagccacctgtcaagagata
ctgctgaagcagccttcaatcctgattttggatgaagggcatactccaaggaacgagaat
actgatgtgctgcagtcccttgcgaaagtacagacacctcgaaaggttgtactttcagga
acgctctatcaaaatcatgtcaaagaggtgttcaatattttaaagcttgtttgtcctaaa
tttctgaaaatggacacatcccggtctgttgttaagcgaataatgagtagagtgcaaata
tctgggttgaagaagcagataaagacaaatgcgcaggacactttttacgaattagttgag
cactctctacaaagtgacgaggattttcaaaggaaagtgacagtcataaaagatctgcgg
gagatgactagtggtgtcctccattattataaaggagatttcttggatgagcttcctgga
cttgtagatttcacagtagtgctgaatctcagttccagacaaaagagtgaaacccagaag
ttaaagaagtggtctaggaagatgaagattgctgcagctggaagtgctacttatctacat
ccgaaattggctacttatctgcatccgaaaatgaattccctctctgagaaaagtgcccca
acagatgataagatggatgagctgttggaaagactggatataaaagatggagtgaaggct
aaattctttctgaatatgttgaacttatgtgaggcttctggtgaaaggttactagttttc
agtcagtacctcctgcccttaaaatttgtggagagactagcagcgaagatgaagggctgg
actcttgggcgggaaatatttgtcatctctggggaatcgaatgctgacgaacgggagtgg
gcgatggatcagtttaataactctcctcactccaaagttttccttggatcaatcaaggca
tgtggagagggaatttctctggttggggcatcccgcatcattattctggatgttcccttt
aatccatcagtgacccgccaagcaatcggcagggctttccggccaggccaaacaaagaaa
gtttatgcatatagattggttgctgctgagtctcctgaggaggaagatcatgccacttgc
ttgaagaaggaactgatctcaaggatgtggtttgaatggaatgagtattgtggttataaa
aattttcaagtggagactgttgatgtgaatgattgtggtgatctctttttggaaagtcag
ctcttaaaggaagatgtacgagttttgtacagaaggtag
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