Citrus sinensis (Valencia orange): 102625658
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Entry
102625658 CDS
T02983
Name
(RefSeq) tRNase Z TRZ3, mitochondrial isoform X1
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
cit
Citrus sinensis (Valencia orange)
Brite
KEGG Orthology (KO) [BR:
cit00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cit03016
]
102625658
Enzymes [BR:
cit01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
102625658
Transfer RNA biogenesis [BR:
cit03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
102625658
Prokaryotic type
102625658
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_4
Lactamase_B_2
Lactamase_B
Anti-Pycsar_Apyc1
Lipoprotein_21
Motif
Other DBs
NCBI-GeneID:
102625658
NCBI-ProteinID:
XP_006465656
LinkDB
All DBs
Position
7:join(8936627..8936998,8937318..8937407,8937505..8937549,8937680..8937734,8938192..8938235,8938349..8938735,8938844..8939109,8939203..8939347,8939447..8939485,8939834..8940234,8940520..8941174,8941371..8941688)
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AA seq
938 aa
AA seq
DB search
MPFITPNLRLLFSSSSSSLFPLKLSVPLLSTKPTNRHRSLFTILSYSKRQRSTPFPQQNQ
RRNRSTFKKEKDKEDHSMEESAKESSFGFNKRRAEGRDKDVHDKKKLQLKVRKLNPINTL
SYVQILGTGMDTQDTSPSVLLFFDNQRFIFNAGEGLQRFCTEHKIKLSKVDHIFLSRVCS
ETAGGLPGLLLTLAGIGDEGLSVNVWGPSDLKYLVDAMKSFIPHAAMVHTHCFGPAPSSD
ASLPDSAKSANHIILVDNELAKISAILLKPSCSDGSPVKPGETSVIYVCELPEITGKFDP
KKAVALGLKPGPKYRELQSGKSVKSDTLDIMVHPSDVLGPSLPGPIVLLVDCPTESHVLE
LLSAESLNSYYADFSGDPQCAKTVNCIIHLSPVSVTGTSNYQKWMKRFGSAQHIMAGHEM
KNVEIPILKSSARITTRLNYLCPQLFPASGFWSLPHFNTSAAESSASEGPVPSICAENLL
KFTLRPLANLGIDRTNIPSLEAPSEITNELLSEVPEVVDAAHQISQFWQGPRELKDDCPM
LDNEVMIEESWLDENRLPNCLDNVRRDDLEIVLLGTGSSQPSKYRNVSSIYVNLFSKGSL
LLDCGEGTLGQLKRRYGVEGADSAVGKLRCIWISHIHADHHAGLARILALRRDLLKGVPH
EPLLVVGPGPLKRYLDAYERLEDLDMQFLHCRYTREASWNDFEGNGEPVKNLSTPGSPFS
TEGLINKTEANLFAKGSCMQSVWKGPGIPVDNNAAFPLLKNLKNVLNEAGLETLISFPVV
HCPQAFGFALKAAERINSVGKVIPGWKIVYSGDTRPCPELVEASRGATVLIHEATFEDGM
MEEAIAKNHSTTKEAIDVGSSAGVYRIILTHFSQRYPKIPVVDETHMHKTCIAFDLMSIN
LADLPILPKVLPYFKLLFKDEMPVDESDDVVDAVSAAS
NT seq
2817 nt
NT seq
+upstream
nt +downstream
nt
atgccttttattacaccaaatttgcgcctccttttctcctcctcctcttcttctctcttt
ccacttaaactctcagttccgctactatccactaagcccacaaaccgccaccgctccctc
tttacaattctctcttactcaaaacgacagcgttccactccgttcccccaacagaaccag
aggcgaaacagaagcacattcaagaaagagaaagataaagaggatcattcaatggaagaa
agcgctaaggaatcatctttcgggtttaataaaagaagggccgagggcagagacaaggac
gttcacgataagaagaaacttcagctgaaagttcgcaagcttaatcccatcaatacacta
tcttatgttcagattttggggaccgggatggatactcaggatacttcaccttcggtcctg
ctgttctttgacaaccaaaggtttattttcaatgctggagagggactgcaacggttctgc
acagagcataagattaaattgtcaaaggtagaccacatatttctttctcgtgtctgctca
gagactgcgggtggactgccaggtctgcttttgactttggctggcataggagatgaagga
ttgtctgtcaatgtatggggtccctcagatcttaagtatttagttgatgcaatgaagtct
ttcattccacatgctgccatggttcatacacactgttttggaccagctccatcctctgat
gcttctctgcctgattcagcaaagtcagccaaccacattattcttgttgataatgagttg
gccaaaatatcagccattctcctgaaaccgagttgctcagatgggtctcctgtgaagccc
ggcgagacatcggtgatatatgtttgtgaattgccagaaattacaggaaaatttgaccca
aaaaaagctgttgctcttggactaaaacctgggccaaaatatagagaactgcaatctggg
aaatcagtgaagtcagataccctagatattatggttcatccaagtgatgttttggggcct
tctcttcctggcccgattgtactccttgttgactgcccaacagaatctcatgtattggag
ttgttgtctgcagaatctctcaatagttactatgcagatttctcgggtgacccacaatgt
gcgaagacagtgaattgtatcattcatttaagtcctgtttctgtcacaggcacttccaac
taccagaagtggatgaagagatttggttctgcccaacatattatggctggacatgaaatg
aagaatgtggaaatcccaattctgaaatcaagcgcaagaataacaacacgacttaattac
ttgtgtccgcagttgtttccagcttcaggtttttggtctcttccgcactttaatacttca
gcagcagagtctagtgcaagcgagggtcctgttccaagcatttgtgctgagaatctcctc
aagttcactctgcgacctcttgctaatcttggaatcgacagaactaatatcccaagtcta
gaggctccctcagaaataacgaatgagttactttcagaagttccagaagttgtagatgca
gcacatcagatcagccagttctggcaagggcctagggagttaaaggatgactgtcccatg
ctagacaatgaagtcatgattgaagagtcatggttggacgagaatagacttcccaattgt
ttggacaatgtaagaagagatgacttggagattgttctactgggaactggttcatcccag
ccttctaaataccggaatgttagttctatatatgttaatcttttctccaaaggaagtttg
ctcctagattgtggtgaaggaaccctgggtcaactgaaaagaagatatggtgtagagggc
gctgacagtgcagttggaaagctaaggtgtatttggatatctcacattcacgctgatcac
catgcgggtttggcaagaatactcgctcttagacgtgatttgttgaagggtgtgccacat
gagccattgcttgttgtaggccctgggcctcttaagaggtacctagatgcatatgaaaga
cttgaagatctagacatgcagttccttcactgtaggtacactagagaagcttcatggaat
gattttgagggcaatggtgaaccagttaagaatctatcaactcctggaagtccatttagt
actgaggggctgatcaataaaactgaggcgaatttgtttgctaaaggaagctgtatgcag
agtgtttggaagggacctggcattccagttgacaacaatgcggctttcccattgctaaag
aaccttaagaatgtgctaaatgaagcagggttggagacgttgattagttttcctgttgtc
cactgtccacaggcatttggtttcgctttgaaggcagcagaaagaatcaatagtgttgga
aaagtgatacctgggtggaagattgtgtattcaggtgacactaggccctgcccagaacta
gtagaagcatctcgaggagcaactgttcttatacacgaggcgacgttcgaggatggcatg
atggaagaggctatagcgaaaaaccacagcacaaccaaggaagccatagacgtgggttcc
tctgcgggtgtttatcgcatcattctcactcacttcagccaaagataccctaaaattcct
gtagttgatgagacacacatgcataaaacatgcattgcatttgacttgatgagcattaac
ctagcagatttgccaatacttcctaaagttcttccctactttaaattgctgtttaaagat
gagatgccagttgatgagtcggatgatgtcgttgatgctgtaagtgcagcttcttag
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