Citrus sinensis (Valencia orange): 102626072
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Entry
102626072 CDS
T02983
Name
(RefSeq) ERAD-associated E3 ubiquitin-protein ligase component HRD3A
KO
K14026
SEL1 protein
Organism
cit
Citrus sinensis (Valencia orange)
Pathway
cit04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
cit00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
102626072
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Gene cluster
GFIT
Motif
Pfam:
Sel1
TPR_27
TPR_16
Motif
Other DBs
NCBI-GeneID:
102626072
NCBI-ProteinID:
XP_006490785
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All DBs
Position
1:join(13620171..13620692,13620994..13621485,13622428..13622643,13623076..13623399,13623491..13623733,13624168..13624389)
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AA seq
672 aa
AA seq
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MPELTSTPKLIICLLILSLYPISLKARPFILVLSQDDIKDSAASTDDESAADWDDFGDSE
SMTEENLDPGSWSPVFEPSIDPGAINGSYYITISKMMSAVTNGDVRVMEEATSEVESAAM
EGDPHARSVLGFLYGMGMMRERNKGKAFLYHHFAAEGGNIQSKMAVAYTYLRQDMHDKAV
KLYAELAEIAVNSFLISKDSPVIEPIRIHNGAEENKGALRKSRGEDDEAFQILEYQAQKG
NAGAMYKIGLFYYFGLRGLRRDRTKALMWFSKAADKGEPQSMEFLGEIYARGAGVERNYT
KALEWLTHAARQQLYSAYNGIGYLYVKGYGVEKKNYTKAKEYFEKAADNEEAGGHYNLGV
MYYKGIGVKRDVKLACKYFLVAANAGHQKAFYQLAKMFHTGVGLKKNLHMATALYKLVAE
RGPWSSLSRWALESYLKGDVGKAFLLYSRMAELGYEVAQSNAAWILEKYGEGSMCMGESG
FCTDAERHQCAHSLWWQASEQGNEHAALLIGDAYYYGRGTQRDYERAAEAYMHARSQSNA
QAMFNLGYMHEHGQGLPLDLHLAKRYYDQALEVDPAAKLPVTLALTSLWIRKNYADSFLA
RLIDALPEVYPRVEAWVENVFMEEGNVTILTLFVCLLTVLYLRERQRRNAVQAAGDVALP
NQHNEHAAAPFN
NT seq
2019 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaattaacatcaacaccaaaactgatcatttgtcttcttatcctctctctctat
cctatatctctcaaagcacgccccttcattctcgtgctctcacaagacgacattaaagat
tcggctgcctctacggacgatgagtcggcggccgactgggatgacttcggcgactccgag
tccatgaccgaagagaaccttgatcctggttcatggagccccgtttttgaacctagcatc
gatcccggtgcaattaacggaagctattacataaccatttcgaagatgatgtctgctgtt
actaacggtgacgtaagagtgatggaggaggcgacttcggaggttgagtctgcggctatg
gaaggtgacccgcatgcgcggtcggtattggggtttttgtacggaatggggatgatgcga
gagaggaataagggtaaggctttcttgtatcatcattttgctgctgaaggtggtaatatt
cagtccaagatggctgtcgcttacacgtatttgcgccaagatatgcatgacaaagcagtt
aaattatatgctgaattagcagagatagcagtgaatagtttcttgatttcaaaagattca
cctgttattgaaccgatcagaattcataatggagcagaagagaataagggtgccttaagg
aagtccagaggggaggacgatgaggccttccagattttagagtatcaggcgcagaaagga
aatgctggagcgatgtataaaatagggctattttactactttggtttgagaggattgagg
cgtgatcgtaccaaggcattgatgtggttttcaaaggctgcggacaagggtgagccccag
tccatggaatttcttggtgagatatatgcaagaggagcaggtgttgaaaggaactatact
aaggcacttgaatggcttacgcatgctgccagacagcaactttattcagcttataatgga
atagggtatttatatgtaaagggttatggagtggaaaagaaaaactatacaaaagcaaaa
gagtactttgaaaaggcagctgataatgaggaggctggtgggcattataaccttggagta
atgtattataaagggattggggtaaagagggatgtaaaacttgcatgcaaatacttttta
gtagctgctaatgcaggtcatcagaaggcattttaccagttggcaaagatgtttcacact
ggtgttgggctaaagaagaatctccacatggctactgcattgtacaaactagttgcagaa
cgaggaccatggagttccttatctagatgggcacttgaatcatacttaaaaggtgatgtg
ggtaaggctttccttttgtattcaagaatggctgagctaggctatgaggtagcacaaagt
aatgctgcctggatccttgaaaagtatggagagggaagcatgtgcatgggagaatctggt
ttctgtactgatgctgagaggcatcaatgtgcacactctttgtggtggcaagcttctgaa
cagggtaatgaacatgctgctttgttgattggggatgcatattactatggtcggggcact
cagagggattatgagcgtgcagcagaggcttacatgcatgcaagatcgcaatccaatgca
caagccatgttcaatcttggttatatgcacgagcatggccaaggacttcctcttgatctt
catcttgccaaacgttactatgatcaagccctagaggttgatcctgcagcaaagttgcct
gtcacacttgcactcacaagcttgtggatacggaagaactatgctgatagtttcctggcc
cgtttgattgatgcattgcctgaagtctatccaagagtggaagcgtgggtggagaatgtt
ttcatggaggaaggaaacgtgacaatattaacactttttgtttgtcttcttactgtcctc
tatctccgtgagaggcagcgaagaaatgctgttcaagcagctggtgatgtggctttgccg
aaccagcacaatgagcatgctgctgctccattcaattaa
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