Citrus sinensis (Valencia orange): 102626077
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Entry
102626077 CDS
T02983
Name
(RefSeq) chloride channel protein CLC-c isoform X1
KO
K05016
chloride channel 7
Organism
cit
Citrus sinensis (Valencia orange)
Brite
KEGG Orthology (KO) [BR:
cit00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
cit01009
]
102626077
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cit04131
]
102626077
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cit04040
]
102626077
Protein phosphatases and associated proteins [BR:
cit01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
102626077
Membrane trafficking [BR:
cit04131
]
Endosome - Lysosome transport
Others
Lysosomal membrane proteins
102626077
Ion channels [BR:
cit04040
]
Chloride channels
Chloride channel (CLC)
102626077
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Voltage_CLC
CBS
Motif
Other DBs
NCBI-GeneID:
102626077
NCBI-ProteinID:
XP_006470992
LinkDB
All DBs
Position
5:complement(join(2205935..2206027,2206197..2207328,2207658..2207927,2208031..2208293,2208409..2208586,2208780..2208980,2209669..2209901))
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AA seq
789 aa
AA seq
DB search
MDHGSRGDREENDIEVEGGGHNGSFESERRKFVERMGSGTSEDHNLREPLLLKCRTNTTS
QIAIVGANICPIESLDYEIVENELFKQDWRARRKVEIFQYVVFKWTLALLIGVLTGLAAV
FCNFFVENIAGFKLLLINNLMLNDRHFMGFVANTSINLGLAILAAILCAYIAPAAAGSGI
PEVKAYLNGIDAHSILAPSTLFVKIFGSIFGVAAGFVVGKEGPMVHTGACIANLLGQGGS
KKYHLTWRWLRYFKNDRDRRDLITCGAAAGVAGAFRAPVGGVLFALEEAASWWRSALLWR
TFFTTAVVAVVLRGFIEFCRSGRCGLFGQGGLIMFDVNSAKNSYSSADLLAVIILGVIGG
IFGSFYNYLVDKVLRTYSIINERGPIFKVLLVAAVSLLTSCCSYGLPWLSHCIPCPSYLE
ADRCPTVGRSGNYKNFQCPAGHYNDLASLFLNTNDDAIRNLFSSGTSKEFHLSTLLVFFV
AIYCLGIITYGIAVPSGLFIPVILAGASYGRLVGNLLGALSDLDTGLFALLGAASFLGGT
MRMTVSLCVILLELTNNLLMLPLVMLVLLISKTVADSFNQGVYDQIVKLKGLPYLEAHAE
PYMKNLVASDVVSGPLITFSGVEKVGNIMHALRLTRHNGFPVIDEPPLTPAPELCGLVLR
SHLLVLLKGKKFTKQKTMTGSDIMRRFKAHDFAKAGSGKGVKLEDLDIKEEEMEMFVDLH
PITNTSPYTVVETMSLAKAAVLFRQLALRHLCVVPKTPGRPPIVGILTRHDFMPEHVLGL
YPHIVNRHK
NT seq
2370 nt
NT seq
+upstream
nt +downstream
nt
atggatcatggaagtagaggagatagggaggagaatgatatagaggttgaaggaggaggg
cataatggtagttttgaaagtgaaaggaggaagtttgttgagagaatgggatcaggaacg
tcagaggatcataatttgagagagccattgttgttgaagtgtaggaccaatacaacttct
cagattgccattgttggtgccaatatctgcccgattgagtctcttgattatgagattgtc
gagaatgagctttttaagcaggactggagagcaagacggaaggttgagatatttcagtac
gttgtcttcaagtggacacttgcactccttattggggtgcttacagggcttgcagccgtt
ttctgtaacttttttgttgagaatatagctggttttaaacttctgcttatcaacaatctc
atgcttaatgataggcactttatgggatttgtagcaaatacgagtatcaacctgggtttg
gccattttagctgcaatcctttgtgcttatattgcccctgcagctgccggctctggtata
cccgaggtgaaagcatatctcaatggtatagatgcccattctatattggctccaagtacc
ctctttgttaagatttttggttccatttttggagttgctgctggatttgttgtcggtaag
gaaggacctatggtacatactggtgcttgcatagccaatttacttggacaaggcggatcg
aagaagtaccatttgacctggagatggctcagatacttcaaaaatgatcgtgaccggagg
gatttgattacatgtggtgcagctgctggtgtagcgggtgctttccgtgcgcctgtaggt
ggggtcctcttcgcccttgaagaagctgcttcatggtggcggagtgctcttctttggagg
acattttttacaacagctgtagtggcagtggtgttgagaggtttcatagaattttgtagg
agtggtagatgtggactgtttggacaaggtgggctaatcatgttcgatgtcaattctgca
aagaactcttatagctccgcagatttacttgcagttattatccttggagttattgggggc
atttttggaagcttctacaattaccttgtggacaaggtcctccgtacatatagcattatc
aacgagagagggcctatcttcaaggtcctgctcgtcgccgctgtttcgcttttgacgtct
tgttgttcttacggcctgccttggctttcacattgcattccttgtccttcttacctggag
gctgatagatgccccactgtaggtcgttctggaaactacaagaattttcagtgtccagct
ggccactacaatgaccttgcttctctctttctcaacacaaatgatgatgcaatccgcaac
ctgttcagctcgggcacttcaaaagaatttcacctctctactcttctagttttctttgtt
gctatatactgcctcggcattatcacctatggcattgctgttccctctgggctcttcatt
ccagtcatacttgctggagcgtcttatggacgccttgttgggaacctcctaggggctcta
tctgatctcgacacaggtctctttgcactccttggagctgcttccttcctcggtggcacc
atgagaatgacagtttcactctgtgttatacttcttgaacttactaataatttattgatg
ctcccattggtgatgcttgttcttcttatttcaaaaactgtggctgatagtttcaaccag
ggtgtctacgaccagattgtcaagttgaaggggttgccttatttggaagcccacgcggaa
ccatacatgaagaatttggttgcaagtgatgttgtttctggtccattgattactttttct
ggggttgaaaaagtcggaaatattatgcatgctctgcgtttaactcggcacaatggtttc
ccagtgatagatgagccgcctctgacaccagctccagagttgtgtggacttgttctcagg
tctcatcttcttgtgttgctcaaaggaaagaaatttacgaaacagaaaaccatgactgga
tcagatattatgcggaggttcaaggcacatgattttgccaaagcaggatctgggaagggg
gtcaagctagaagatttggacattaaggaggaggagatggagatgtttgttgatctccat
cccattactaatacatctccatacacagttgtagaaacaatgtcgctagctaaagcagct
gttctctttcggcagctggccctcaggcacttgtgcgtcgtgccaaaaacacccgggagg
cctcctattgttggaatcttaacccgacatgacttcatgccggagcatgtgttaggactt
tacccacatattgttaatcgccacaagtag
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