Citrus sinensis (Valencia orange): 102626122
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Entry
102626122 CDS
T02983
Name
(RefSeq) nuclear pore complex protein NUP54
KO
K14308
nuclear pore complex protein Nup54
Organism
cit
Citrus sinensis (Valencia orange)
Pathway
cit03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
cit00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
102626122
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cit03019
]
102626122
Messenger RNA biogenesis [BR:
cit03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
102626122
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup54
CTD
Motif
Other DBs
NCBI-GeneID:
102626122
NCBI-ProteinID:
XP_006484075
LinkDB
All DBs
Position
4:join(25393476..25393808,25393917..25393970,25394076..25394135,25394294..25394404,25395895..25395960,25396038..25396124,25396391..25396492,25396583..25396732,25397025..25397141)
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AA seq
359 aa
AA seq
DB search
MFGAQASAPAFGTPSSTPAFGTPSSTPAFGTPSTSSFGSSLFSTPFSSQPQQQQQQQQMT
PFQQPATGFTGFGFQAPSAAPQLSPFPNAQLTTQMAPVAPLQFSLAERDIQAIVDAYKEE
PTNPKYAFKHLLFSVTEPQFRVKPPGVSDIMWAEAMGKLEGMDSTDRERLWPQLVQGFKD
LSNRLKLQDEVILSDAERLRITQSNVKMLQRHFQAETLPWIERMRVNEQSLQRRLLRVMR
IVEALESKGCRLPLMKGEVELAEKLASITRQLKGSGAELSRRVQNLLTVSRVQANSIGAG
GSICLPGSTKIHEQSLADMQEVLQQQTEAIARLGNVLKRDIRDMEIIMAEDSQMTEDVS
NT seq
1080 nt
NT seq
+upstream
nt +downstream
nt
atgtttggagctcaagcttcagctccagccttcggcacgccgtcttccacgccggcgttc
ggcacgccttcttccacgccggcgttcggcactccttcgacgtcgtcgtttggctcctct
cttttctccactccgttctcttctcaacctcaacagcaacagcaacaacaacagatgaca
ccgtttcagcagccagcaactggattcactggattcgggtttcaggcaccgtcggccgcg
ccgcagctgagtccttttcccaatgctcaattgaccactcagatggctcctgtggccccg
ctgcaattctctcttgccgagcgcgacattcaagcgattgttgatgcttacaaggaagag
cctacaaaccctaagtatgcttttaagcatttgttgttcagtgttactgaaccacagttt
agggttaagccacctggtgtttcagatatcatgtgggcagaggctatggggaagttggag
gggatggatagtactgaccgggaacgcttgtggcctcaacttgttcagggtttcaaagat
ctttcgaatcgcctgaagctccaagatgaagtcattctttcagatgctgagagattaaga
attactcagagcaatgtgaaaatgcttcaaaggcattttcaagctgaaactctgccttgg
attgaaagaatgagagtaaatgagcaaagtcttcaaaggcgtcttttaagggtgatgaga
attgttgaagcattggagagcaagggatgccgattgcccttaatgaaaggggaagttgaa
ttggctgagaagttagcttcaataacaagacagctgaaaggatctggtgcagaactttct
aggagggttcaaaacttgctcactgtatctcgtgttcaagcaaattccattggtgctggt
ggttctatttgtcttccaggatcaaccaaaatacacgaacagagtcttgctgatatgcag
gaggtattacaacagcagacagaggctattgcaaggcttggcaatgtgttgaagcgagat
attagggatatggaaataataatggctgaggactcgcagatgacggaagatgtgagctga
DBGET
integrated database retrieval system
