Citrus sinensis (Valencia orange): 102626295
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Entry
102626295 CDS
T02983
Name
(RefSeq) exopolygalacturonase-like
KO
K01213
galacturan 1,4-alpha-galacturonidase [EC:
3.2.1.67
]
Organism
cit
Citrus sinensis (Valencia orange)
Pathway
cit00040
Pentose and glucuronate interconversions
cit01100
Metabolic pathways
Module
cit_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
cit00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
102626295
Enzymes [BR:
cit01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.67 galacturonan 1,4-alpha-galacturonidase
102626295
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Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Glyco_hydro_49
Motif
Other DBs
NCBI-GeneID:
102626295
NCBI-ProteinID:
XP_052289910
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All DBs
Position
9:join(8012092..8012550,8012666..8013181,8013296..8013529)
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AA seq
402 aa
AA seq
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MDYSSCSQLLVLAILVLFTLAQNIINAAPNGVFNVIDFGAVADGIRDNSKAFENAWREAC
NWNTYSTVLVPPGKYLVTSVVFKGPCKAPISFQLQGLILAPPGLSKLADKESWITFESLR
SFTLTGGGTFHGQGRTAWPENQCHKNSNCQLPISIRFNKLNDSTITGVQSVDSKFFHINI
LGCYNLKLNKINISAPDDSPNTDGIHIGRSNGIEISNSIIATGDDCVSLGDGSQNVLVSD
VSCGPGHGISVGSLGKYKKEEDVVGLTVINCTFTGTSNGVRIKTWPDSEDGKASNFTFED
LFMNNVENPIVIDQEYCPHNQCNIKVPSRVKISNVRFRNIRGTSLTKEAVRIVCSKEIPC
QNVEIGDINLVYNGIDDKGPAISSCSNVKPTLVGKQIPATCV
NT seq
1209 nt
NT seq
+upstream
nt +downstream
nt
atggattatagctcttgctctcagctgctagtacttgcaatcctagttttgtttactttg
gcccaaaatataatcaatgcagctcccaacggagttttcaatgtaattgactttggtgct
gtggccgatggcattagagataacagtaaggcttttgaaaatgcttggagagaagcttgc
aattggaatacctacagcacagtattggttccaccaggaaaatacttggtgacttctgtt
gtatttaaaggtccatgcaaagctccaatttcatttcaacttcaaggccttatcctggct
ccccccggtctgtcaaagctagccgataaggaaagctggatcacctttgaatccctcaga
agcttcactctcaccggtggtggaactttccatggccagggccgaactgcatggcccgaa
aatcaatgccacaaaaattcaaattgccagcttcccatttcgatacgatttaataaactg
aatgactcgacaatcactggggtgcaatctgttgatagcaagttcttccacattaacatc
ttgggttgctacaatttgaagctgaataaaattaacatctctgcacctgatgatagtccg
aatactgatggaattcatattggaagatcaaatggcattgagatatcgaattcaataata
gccactggagatgactgtgtctctcttggtgatggcagtcaaaatgtcttggtgtctgat
gtttcttgcggaccaggacatgggatcagtgttggcagccttggaaaatataaaaaggaa
gaagatgtagttggattgacagtcatcaattgcactttcacaggcacaagtaatggtgtg
agaattaagacatggcctgattctgaggatggaaaggcttccaatttcacatttgaagac
cttttcatgaataatgtggaaaatcccattgtcattgatcaggagtattgcccacataac
caatgtaacataaaggttccttcacgggtgaaaattagcaatgtgagatttaggaacatc
cgaggaacttcattaacaaaagaggctgttagaattgtttgcagcaaagagattccatgc
caaaatgttgagattggagacataaatttggtgtataatggtattgatgataagggcccg
gcaatatcttcttgttcaaatgttaaaccaactcttgtcggaaaacagattccagcaact
tgcgtctaa
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