Citrus sinensis (Valencia orange): 102626426
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Entry
102626426 CDS
T02983
Name
(RefSeq) probable pectate lyase 13
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
cit
Citrus sinensis (Valencia orange)
Pathway
cit00040
Pentose and glucuronate interconversions
cit01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cit00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
102626426
Enzymes [BR:
cit01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
102626426
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Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
NosD
Motif
Other DBs
NCBI-GeneID:
102626426
NCBI-ProteinID:
XP_006485318
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All DBs
Position
4:complement(join(5590140..5590380,5593183..5593388,5593715..5594606,5595142..5595278))
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AA seq
491 aa
AA seq
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MLLNTCILLECLFFLIFSSSATISSLNLTLPHQHPDPDAVAQDVQRRVNVSLSRRQALAI
NAQCQTGNPIDDCWHCDPNWAANRQRLADCSVGFAQGTLGGKGGQIYVVTDSSDSDPANP
TPGTLRHAVIQTEPIWITFASNMLIKLKHELIINSYKTIDGRGANVEITGNGCLTLQYVS
HVIIHNVHIHHCKPSGNTMIASSPTHVGYRGKSDGDGISIFGSQKIWVDHCSLSYCTDGL
IDAIMGSTGITISNNYFSHHNEVMLLGHNDKYALDMGMQVTIAFNHFGVALVQRMPRCRR
GYIHVVNNDFTSWEMYAIGGSANPTINSQGNRYTAPPDDNAKEVTKRVETDESEWAGWNW
RTEGDVMVNGAFFVPSGVGLSTQYAKASSVEPKSAALIDRLTMNAGVFGGPRDDEGEGNS
YPGFSGGGSGSGGTNRNNGDGDFFGMVFGSGASRLPPPSPSTSIFLSLLIILILYTITNH
DAPLSLQLLLL
NT seq
1476 nt
NT seq
+upstream
nt +downstream
nt
atgcttctaaacacctgcattctcttagaatgcctcttcttcctcattttctcctcttct
gctacaatttcttccctcaatctcactttaccccatcagcatcctgaccctgacgctgtt
gctcaagatgtgcaaaggagagttaatgtatctctatcaagaagacaagcgctcgccatt
aacgcccaatgccaaaccggaaaccccatcgacgactgctggcactgcgacccaaactgg
gcagcaaaccggcaacggttagccgactgcagcgtcggcttcgcccaaggtaccctcggc
ggcaaaggcggccagatctacgtcgtcaccgactcctccgacagcgacccggcgaacccc
acgccgggcaccctccgccacgccgtcatccaaacggaacccatctggatcaccttcgcc
tccaacatgctcatcaagctcaaacacgagctcatcatcaacagctacaaaaccatcgac
ggccgcggcgccaacgtcgaaatcaccggcaacggctgcctgacgctccagtacgtgtcc
cacgtcatcatccacaacgtccacatccaccactgcaagccctcggggaacacgatgatc
gcctcgtcgccgacccacgtcgggtaccggggcaagtcggacggtgacgggatctccata
ttcggctcgcagaagatatgggtggatcactgctcgctgagctactgcaccgacgggctg
atcgacgcgataatggggtccacggggataacgatctccaacaattatttctcgcaccac
aatgaggtgatgctgctggggcacaacgacaagtacgcgctcgatatggggatgcaagtt
accattgcgtttaaccacttcggtgtggcgctggtgcagcgaatgccacggtgccggcgc
gggtacatacacgtggtcaataatgacttcacctcatgggaaatgtatgctattggcggt
agcgcgaaccccaccattaacagtcaagggaatcgctacaccgctccgcccgatgataat
gccaaagaggtgacgaagcgcgtggagacagacgagagtgagtgggcgggctggaattgg
aggacggagggggacgtaatggtaaatggggcattctttgtgccgtcaggcgtggggctc
agcacgcagtacgcaaaggcctcgagtgttgagcccaaatcagccgccctcatcgaccgg
ctgaccatgaacgccggcgtcttcggtgggcccagggatgatgaaggggagggcaactct
tatcccggattcagcggcggtgggtccggcagcggcggcaccaaccgcaacaacggtgat
ggcgacttctttggaatggtattcgggagcggcgcgtcgcggctcccaccaccctctcct
tcaacctcaatctttttgtctcttctaattattttgattttgtacactatcaccaaccat
gatgctccattatcattacaattattattgttatag
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