Citrus sinensis (Valencia orange): 102627031
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Entry
102627031 CDS
T02983
Name
(RefSeq) cyclic nucleotide-gated ion channel 1-like isoform X1
KO
K05391
cyclic nucleotide gated channel, plant
Organism
cit
Citrus sinensis (Valencia orange)
Pathway
cit04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
cit00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
102627031
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cit04040
]
102627031
Ion channels [BR:
cit04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
102627031
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
cNMP_binding
Ion_trans
Motif
Other DBs
NCBI-GeneID:
102627031
NCBI-ProteinID:
XP_006490536
LinkDB
All DBs
Position
9:complement(join(1092217..1092723,1092827..1093063,1093160..1093271,1093492..1093775,1093923..1094129,1094307..1094739,1094849..1094850))
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AA seq
593 aa
AA seq
DB search
MSQDLRLEEGANPVSGHFQGGLQSGVEIKKLAQSCNHFLAKCFLLLKKIHDPQRPYGYWV
FLISCVMIISVDPVFFYVPTIAAERKCLGFDGELRITAIALHSISAIVYLTYVNYLLPTA
SPKIEVKHFWHFSLIDLLVVLPLPLVLLILIIDIPELGVQNFMFPMNFFLLQYLLRVTRC
YTLFTKATRVSGILAEAKWAKAAFNFLLYLNGGHVFGALWYFSAVAREMICWEHACSVST
TGCSRRSFYCSHENSIDNQWFFSVNDLCRDDLAFDFGIFKEAIQHQIVDVTSFVGKFPYC
LRWGLQSLSSFGQSLQPSASPGENIFVISIITYSMVLFVLFIGNMEMYLQSVTIKSENVR
LKEREIEQWMSSRQLSEKFQMEFKKYQPYKWQEIPRIDVASNLLNLPKDLKRNIKRELCL
EQIKQVQELKKFNEATLDSLCECLKLAYYNERSYIGREGNPVDEMLFVVQGKLRVYTSVS
TVRTGSQRTGHRDHKNHHLKGGDFCGEELVAWFQADPYSSNFPVSTRTIQALTDVEAFVL
MADDLQNLFIKQHSVHFLQSYWRFRRIWRSKRNAQIYLGGINATNTVSATTGA
NT seq
1782 nt
NT seq
+upstream
nt +downstream
nt
atgtctcaagacttaaggttggaggaaggtgcaaatccggtttccggacattttcaagga
ggcttacagtctggagttgaaattaaaaaactagcccaatcttgtaaccattttttggca
aaatgctttcttcttctgaagaaaatacatgacccgcagaggccttacgggtactgggtt
tttctaatatcatgtgtgatgattatttcggtggatccagtgttcttttatgttccgaca
atcgctgctgagcgaaagtgccttggtttcgacggagagttgcgtatcacggctattgct
ctccattcaatatccgctatcgtttatttgacatatgttaactaccttctgcctaccgct
tcacctaaaatcgaagtgaaacatttctggcacttctctctgattgatcttcttgtcgtt
cttccccttcctctggtgctgctgattttaattattgacataccagaactcggagtccag
aactttatgtttccaatgaacttctttcttcttcaatatttgttaagagttactcgatgc
tacacattatttacaaaagccacaagggtatcaggcatacttgcagaagctaaatgggcc
aaagctgctttcaattttcttctttacctgaatggtggtcatgtattcggagctctatgg
tacttttctgctgtagcaagagagatgatatgttgggagcatgcctgctctgtttctacc
actggatgcagtcgtaggtctttttattgtagccatgagaattcaatagacaaccaatgg
ttcttttctgtaaatgatctttgtcgagatgatctggccttcgattttggaatatttaaa
gaagcaattcagcatcagattgtggatgtcaccagtttcgtagggaagttcccatattgc
ttacgatggggcctgcaaagtctcagtagttttggtcaaagcctgcaaccaagtgcctct
ccaggggaaaatatcttcgtaatttccataatcacctactccatggtgctctttgtcctt
tttataggaaatatggagatgtatctacagtctgtaactataaagtcggagaatgtgaga
ctgaaggaacgagagatagagcagtggatgtcctcgcggcagctatctgagaaattccaa
atggaattcaagaaataccagccatataaatggcaagaaatcccacgcattgatgtagca
agtaatttgctcaatcttcccaaggaccttaaaaggaacataaaacgtgaactctgttta
gaacagataaaacaagtgcaagagctgaagaagttcaatgaagcaacactggattccctc
tgtgaatgtttgaagctggcttactacaatgagcgctcttacattggccgggagggtaat
ccagttgatgagatgctcttcgtggtgcagggcaagctgagggtctacacttctgtcagt
actgtaagaactggatctcagaggactggtcaccgcgatcacaaaaatcatcatctgaaa
ggcggggacttctgtggagaagaacttgttgcttggtttcaggctgacccgtactcttct
aactttcctgtatcaaccagaacaattcaagcgcttactgatgttgaagcttttgttctc
atggccgatgacttgcaaaatctgtttattaaacagcactcagttcatttcttacaatca
tactggcgtttcagaaggatttggcgttccaaaaggaatgcacaaatatatctcggagga
ataaacgccaccaatacagtttcagcaacaactggggcttag
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