KEGG   Citrus sinensis (Valencia orange): 102627181
Entry
102627181         CDS       T02983                                 
Name
(RefSeq) RNA polymerase I-specific transcription initiation factor rrn3-like isoform X1
  KO
K15216  RNA polymerase I-specific transcription initiation factor RRN3
Organism
cit  Citrus sinensis (Valencia orange)
Brite
KEGG Orthology (KO) [BR:cit00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:cit03021]
    102627181
Transcription machinery [BR:cit03021]
 Eukaryotic type
  RNA polymerase I system
   Other transcription-related factors
    Transcription initiation factors
     102627181
SSDB
Motif
Pfam: RRN3 DUF2112
Other DBs
NCBI-GeneID: 102627181
NCBI-ProteinID: XP_006483559
LinkDB
Position
1:complement(join(428079..428373,428602..428786,429033..429152,429349..429436,430011..430094,430566..430672,431342..431410,431495..431620,431900..432013,432101..432217,432979..433218,433314..433385,433487..433558,433658..433741,433887..434000))
AA seq 628 aa
MGMELPKDHAESHEMEDVNISDLELVYHVREALTSVQSGDNDNYNQLVAVMHLSGRLDPD
NRALLETSLKALSGAVSYIDISHHESLLVSIFGMSMWNYDPDIMDALKGLIISLAASSGK
YVDSCLTMLVGNFTPPSYFLDKLKEPHGLERKHQVLSRVHAALKSIFDLVPLAPMRLLPI
VVQRMPTVHNKHERLKLIVVYTENMLKLESSAMGELVRSTLLMAVVDRLIDLDMEIGWDD
ILHDDFSKGIFEMELEDVEEAADDAEQVGDELPSGSISRKSLSGNLIAELLDSLLVLTFE
HLESCEGTGRLIEVFEILLQSFQITVLNAYKSKFAQFVMFYACALDPENCGLRFATMLAD
VFVSGLYPPLTRMSSVSYLASYLSRARFLSPCFIVSLLKRLVDWCLEYCNIPGGNINPKA
HRVFYSGCQAIMYVLCFRMRSIMDVPRLKSQLLLMPLETVLKHNLNPLKVCLPSVVSEFL
QQSKAARLFTVSETFIFNDLLESELSRDFGGLERLDMFFPFDPCLLKKSDSFIRPNFVYW
SMVKTAYHGDEEDNSDEDVDEDNGDHVMVDGMGRSPDEQDLDLDEFEYSLNKMSITPKNS
FSCRLDGELRQPMKMPSRIRPSTSPESL
NT seq 1887 nt   +upstreamnt  +downstreamnt
atgggaatggaattaccaaaagatcatgctgaatctcatgagatggaggatgttaatatt
agtgacttggaattagtctaccatgtaagagaagccctcacgtctgtccaatcaggtgat
aatgacaattacaaccaactagttgcggttatgcacctttcgggacgtcttgatcctgac
aatagggctttgcttgagacaagtttgaaggcgctatctggagcagtttcttatatagac
atttcccaccacgagtctcttcttgtttctatttttggaatgagcatgtggaactatgat
ccagatattatggatgcactgaaaggcctgattatatccttggctgcttccagtggaaaa
tatgttgattcatgtttaactatgctcgtcggcaacttcacaccgccaagttatttccta
gataaactgaaagaacctcatggtcttgaaagaaagcatcaagttctttcccgggtgcat
gcggctttgaaaagtatttttgacttggtgcctcttgccccgatgagattattgcccata
gttgtgcagagaatgccaactgtccataataagcatgagcgattgaagttgattgttgtt
tacacggagaacatgctaaagctggagagcagtgcaatgggagaacttgttagaagcaca
ttgcttatggcagtggtggataggctaatagatttggatatggagattggatgggatgac
attttacatgatgattttagtaaaggcatatttgagatggagttagaagacgtggaagag
gctgcagatgatgctgagcaagttggtgatgagcttccaagtggctctataagtcggaag
agtttaagtggaaacctaattgctgaactacttgatagtttgctggtgctaacttttgag
catcttgaatcatgcgaaggcacaggccgcttgattgaggtatttgaaattcttcttcag
tcattccagataactgttctaaacgcgtacaagtcgaagtttgctcagtttgtgatgttt
tatgcatgtgcattggatcccgaaaactgtggtctgagatttgccacaatgcttgcggat
gtctttgttagtggtctctatcctccactcacaaggatgagttctgtgtcttatcttgct
agttacctgtctcgtgcgaggtttttgtctccctgtttcattgttagcttgttaaaaagg
ttggtggattggtgtttggagtactgtaatataccaggtggtaacataaaccctaaagcc
catagagtgttttattcaggatgccaggccattatgtatgtgctatgctttcgtatgaga
tctataatggatgtaccgaggctcaagtctcagcttctccttatgcctctagaaacagtt
ttgaagcacaatttgaacccattaaaggtatgcctaccatctgtggtttcagagtttctc
caacaatcaaaagctgctcgtctattcaccgtgtctgaaacctttatatttaatgatctg
ctggagtcggaactttccagggattttggtgggctggaaaggttggacatgttctttccg
tttgatccatgtttgctgaagaaatctgacagtttcatacggcctaacttcgtttactgg
tcgatggttaaaactgcttatcatggcgacgaagaagacaacagcgatgaagacgtagat
gaggataatggagatcatgttatggttgatgggatgggtaggagtcctgatgagcaggat
cttgatctcgatgagtttgagtattcattaaacaaaatgtccatcactcctaagaattcc
ttcagttgtcggttggatggtgaattgcgacaacccatgaaaatgccctcaagaattagg
ccctcgacgagtccagaatctttgtga

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