Citrus sinensis (Valencia orange): 102627992
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Entry
102627992 CDS
T02983
Name
(RefSeq) E3 ubiquitin-protein ligase SIRP1
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
cit
Citrus sinensis (Valencia orange)
Brite
KEGG Orthology (KO) [BR:
cit00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cit04131
]
102627992
04121 Ubiquitin system [BR:
cit04121
]
102627992
Enzymes [BR:
cit01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
102627992
Membrane trafficking [BR:
cit04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
102627992
Ubiquitin system [BR:
cit04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
102627992
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
Zn_ribbon_19
zf-RING_11
zf-C3HC4_2
zf-C3HC4
zf-rbx1
zf-ANAPC11
zf-RING_UBOX
zf-C3HC4_3
Motif
Other DBs
NCBI-GeneID:
102627992
NCBI-ProteinID:
XP_006488959
UniProt:
A0A067EH51
LinkDB
All DBs
Position
2:121506..122633
Genome browser
AA seq
375 aa
AA seq
DB search
MDDGVAASRYWCHMCSQIVDPIMEVEIKCPFCQSGFVEEMGSGSNNNNHQVPDSEFGSDR
ALSLWAPILLGMMGNQRPHGRRFRRTDYEEDDNDDENHDEYEGELESIITRRRRRNSAAI
LQLLQGLRAGLQSESEDNDNDRERDRDRGDRDRDRDRESERERVILINPFNQTIIVQGGS
YDGQHQNHNHTPIGSLGDYFVGPGLDLLLQHLAENDPNRYGTPPAQKEAVEAMPSVKIEE
TLQCSVCLDDFEIGTEAKEMPCKHKFHSQCILPWLELHSSCPVCRCQLPADEFKPESERS
RNSSNHQREHEHHSSDHGTHASSEEGDGEGRNESGSRFSIPWPFNGLFSSSSSHSGGNNS
TSTSQSGSTSQMNEN
NT seq
1128 nt
NT seq
+upstream
nt +downstream
nt
atggatgatggagttgcagcatctaggtattggtgtcatatgtgttcacaaattgtggat
ccaatcatggaagtagagatcaaatgcccgttttgtcaaagtgggtttgttgaagaaatg
gggtctggttctaacaacaacaatcatcaggtccctgattctgagtttggatccgatcgt
gccctttctttatgggcaccaatcttgttaggaatgatggggaaccagcgtccgcacggt
agaaggtttaggagaacagactatgaggaggatgataacgatgatgagaatcatgatgaa
tatgagggtgaacttgaatcaattattacgaggagaagaagaagaaactcggctgctatt
ttgcagctgctgcaaggacttcgagccgggctgcaatcggaatctgaggataatgataat
gatagggagagagatagagatagaggtgatagggatagagatagagatagggaaagtgaa
agggagcgtgtgattttaatcaacccttttaatcagactatcattgttcagggcggttct
tacgatggtcaacaccagaatcataatcataccccaattgggtcgctaggcgactacttt
gttggtcctggtttggacttgttgttgcaacatttggctgagaatgatccaaacagatat
gggactccaccagcacaaaaggaggcagttgaagcaatgcctagtgtgaaaattgaggag
actttgcagtgttctgtgtgtttggatgatttcgagattggtactgaagcaaaggaaatg
ccatgtaagcataagtttcatagtcagtgtatattgccatggttggagcttcatagttct
tgtccagtttgtcggtgtcaattgcctgctgatgaattcaagcctgagtctgagaggtct
cggaacagcagtaaccaccaaagggagcatgagcatcatagtagcgatcatggtactcat
gctagcagtgaagagggagatggtgaagggagaaatgaaagtgggagtagattttcaatt
ccgtggcctttcaatggtctgttctcttcctcaagttctcattctggaggaaacaattca
acctcaacttctcaatccggaagtacttctcaaatgaatgagaattga
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