Citrus sinensis (Valencia orange): 102628125
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Entry
102628125 CDS
T02983
Name
(RefSeq) YTH domain-containing protein ECT2 isoform X1
KO
K20102
YTH domain-containing family protein
Organism
cit
Citrus sinensis (Valencia orange)
Brite
KEGG Orthology (KO) [BR:
cit00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cit03019
]
102628125
Messenger RNA biogenesis [BR:
cit03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
102628125
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YTH
DUF3942
Motif
Other DBs
NCBI-GeneID:
102628125
NCBI-ProteinID:
XP_006474353
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All DBs
Position
9:join(31238499..31238541,31239283..31239320,31239431..31239602,31239942..31240012,31240098..31240499,31240899..31241405,31242237..31242449,31242880..31243284)
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AA seq
616 aa
AA seq
DB search
MATPLPDHDRIVPTGERPVKPDNSTEQLLSPKDERIVSANPSPDAAIIGPAKDVTEQPES
ADSRDYSSVHQLNTYNSHDPNMSYGYGNNTTWDGYSQYINADGLHVSPVIYNDNTSLMFH
SGYGFNPEMAYGQYSPIATPLPSIMVEGQLYSPQQIPFSPSYYPQHGPPNVPSALPVSPS
EMMTAESSGDNLLFGPSSGYFVHFGSYGVNVSGNPASSPLTSPAAYPQPMGILGSYEQNI
GQISQQQRSFNTFGLASSSSTGNYPHGAVYQSSYFGSNDRVRLAADKGRRRERDQDSICI
SNESPAIDRNRGPRASKIKGKSSEQNLSSGSSKNNSSGSGINFELYNQFDFPTDYENAKF
FVIKSFSEDNVHKSIKYGVWASTPHGNKKLDAAYHEAKETDNRCPIFLLFSVNASGQFCG
VAEMVGPVDFENSADYWQQDRWSGQFPVKWLIIKDVPNSRFRHLLLENNDNKPVTHSRDS
QEVKLEQGVEMLRIFKEHDARTSILDDFDFYDERERSLKERRAKQQVSLTKGAPDLLAND
SMNQISDRLAQSLRLQDTVEETPASIIGAVSRTDVSGSLANDSINTISDSYSEAVESGYK
SNKEIFTTETGSENQN
NT seq
1851 nt
NT seq
+upstream
nt +downstream
nt
atggccacgccactccccgatcacgatcgaattgttcctacaggagagagacctgttaag
ccagataattcaacagagcagctactttcgcccaaagatgaaaggattgtttcagcaaat
ccttctccggatgcagccatcattggaccagcaaaagatgtcacagaacagccagaatct
gctgacagtagagattatagctctgtccaccaactaaatacctacaactcccatgatccg
aatatgtcatatggttatggaaacaacactacttgggatggttattctcaatatattaat
gctgatggcttgcatgtatcaccggttatatacaatgataacacatcccttatgttccat
tctggctatggcttcaatcccgaaatggcgtatggacaatattccccaattgctacacca
ctgccttctataatggtggaaggccaactttactcaccacagcaaatccccttttctcca
tcttactacccacaacatggtcctccaaacgtgccatcagcacttccagtttcaccatct
gagatgatgacagcagaaagtagtggtgacaacttgctttttgggccaagttcaggttat
tttgtacattttggatcatatggagttaatgtatctgggaatcctgcatctagtccttta
acttctccggcagcttatcctcaaccgatggggatacttgggtcctatgagcagaatatt
gggcagatttctcaacaacaaaggtcattcaatacatttggattggcatcaagttcttcc
acgggaaattaccctcatggtgctgtttatcaaagctcttattttgggagtaatgaccgg
gtcagactagctgctgacaagggcagaagacgagagagagaccaggattcgatttgcatt
tccaatgaatcacctgctattgaccgaaatcgaggaccaagagcttcaaagatcaagggc
aagagcagtgaacagaacctgtcatctggtagtagcaaaaacaattcatcaggctctgga
attaattttgaattatacaaccagttcgattttcccactgactatgagaatgcgaagttc
tttgttatcaagtcctttagtgaagacaatgttcacaagagtattaaatacggtgtttgg
gccagcacacctcatggaaataaaaaattagatgctgcttaccatgaagcaaaggagacc
gataacagatgtcctatcttcctactgttttcggtcaatgctagtggacagttttgcggg
gtcgctgaaatggtaggacctgtagattttgagaacagtgctgattactggcagcaagat
aggtggagtgggcagttcccagtgaaatggcttattatcaaagatgttcctaacagtcga
tttcgccacttgcttcttgaaaataatgataacaagcctgtaactcacagccgagattct
caagaggtgaaattagaacagggtgttgagatgttgagaatttttaaggagcatgatgca
cgtacatctattttagatgattttgacttctatgatgagcgagagagatctctgaaagaa
aggagggccaaacaacaagttagcctgacaaaaggtgctccagatttacttgccaatgat
tctatgaaccaaatttcagataggttagctcaaagcctccggttgcaagacactgttgaa
gaaactccagcaagtattattggtgctgtctcaagaactgatgtttcaggttcacttgct
aatgattccataaatacaatttctgatagctactctgaagctgtcgagtcgggatacaag
agtaacaaagagatattcacaactgaaacaggtagtgagaatcagaattaa
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