Citrus sinensis (Valencia orange): 102628313
Help
Entry
102628313 CDS
T02983
Name
(RefSeq) RNA pseudouridine synthase 7
KO
K15454
tRNA pseudouridine32 synthase [EC:
5.4.99.28
]
Organism
cit
Citrus sinensis (Valencia orange)
Brite
KEGG Orthology (KO) [BR:
cit00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cit03016
]
102628313
Enzymes [BR:
cit01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.28 tRNA pseudouridine32 synthase
102628313
Transfer RNA biogenesis [BR:
cit03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
102628313
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_2
Motif
Other DBs
NCBI-GeneID:
102628313
NCBI-ProteinID:
XP_006493250
LinkDB
All DBs
Position
4:join(16397305..16397476,16397608..16397651,16397780..16397857,16398020..16398120,16398227..16398314,16399116..16399194,16399377..16399459,16400075..16400140,16401061..16401117,16401927..16402052,16402552..16402769,16403565..16403670)
Genome browser
AA seq
405 aa
AA seq
DB search
MKRKREEEKSKANDSNSNGNGNGNGNGNGNGNSSNNMEIVWQTPANPPVKEDYIFRDGRR
NVKPYYFEFISHVKNRWAGKTIVDLFAEEFKGRPYDYYVSAVKCGRIQVDEEMVPVSYTV
KSSQKISHFLHRHEPPVMAWDVSILQKEPDVLTVCKPPSVPVHPCGQYRKNTVVGILQAE
HDFAPLFPVHRLDRLVSGLLILARNASKADLFRQQIEAGKVIKRYIARVNGVFPEGEQVV
DVNINYNASAGRSTAESGDSLGDTPLKGKAACTKFTRISTNGTHSIVLCEPITGRTHQIR
VHLQYTGYPIANDMLYLCEHVTHREGMSADRAAAYSHHSPPPVSSDKSESSSEDFSIDPM
CTNCPNLAPKGYEGHEEGLWLHCVRYSGPGWTYECPYPDWATLSL
NT seq
1218 nt
NT seq
+upstream
nt +downstream
nt
atgaagaggaagagagaagaagaaaagagtaaggctaacgacagcaacagcaacggcaac
ggcaacggcaacggcaacggcaacggcaacggcaacagtagtaacaacatggagattgtt
tggcaaacgccagcaaatccaccagtgaaagaggactacatttttcgcgacgggaggcgc
aacgtcaaaccgtactacttcgagttcatttctcatgtaaagaatcgctgggctggaaaa
acaattgttgatttgttcgcggaggagttcaaaggccgaccttatgattactatgtaagt
gctgtcaaatgtggacggatacaagttgatgaagagatggtgccggtttcatacacagta
aaatcgtcgcaaaaaattagccacttcttacacaggcatgaaccaccagtgatggcttgg
gatgtttcaattcttcagaaagaaccagatgtattgactgtttgcaaaccgccatctgtt
cctgtgcatccatgtggtcaatatcggaagaacacggttgtgggaattcttcaggcagag
catgacttcgcacccctatttccggttcatcgactagatcgtcttgtctcaggactcctt
atcttggctagaaatgcttctaaagctgacctttttagacaacagattgaagccgggaag
gtgataaaacgttatattgcaagggtcaatggggtatttccagagggtgagcaagttgtt
gatgtaaacataaattataatgctagtgcaggaaggagcactgcagagtctggtgactcc
cttggtgatacgcctttgaagggaaaggctgcttgtacaaagtttaccaggattagtacc
aacggaactcatagcattgttttgtgcgaaccaatcactggccgaactcatcaaatacgt
gtgcatttgcaatatacaggctatccaatagccaatgacatgctttacctctgtgaacac
gttactcatcgcgaaggaatgagtgctgatagagctgctgcttattcacaccattctcca
ccacctgtttcttctgataagtctgagagctctagtgaagatttcagcattgatcctatg
tgtacaaattgtccaaatttggctccaaaaggatacgaaggacatgaagagggcttgtgg
ttacattgtgttcgatactctggacctggatggacatatgaatgcccttatcctgattgg
gcaacacttagcttataa
DBGET
integrated database retrieval system
