Citrus sinensis (Valencia orange): 102628356
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Entry
102628356 CDS
T02983
Name
(RefSeq) uncharacterized protein LOC102628356
KO
K15559
regulator of Ty1 transposition protein 103
Organism
cit
Citrus sinensis (Valencia orange)
Brite
KEGG Orthology (KO) [BR:
cit00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cit03021
]
102628356
Transcription machinery [BR:
cit03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
102628356
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CID
CTK3
Effector_1
CREPT
Motif
Other DBs
NCBI-GeneID:
102628356
NCBI-ProteinID:
XP_006484771
LinkDB
All DBs
Position
4:complement(join(20699858..20700724,20703328..20703363,20703447..20703586,20704866..20705022,20705152..20705307,20706882..20707129,20707422..20707500))
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AA seq
560 aa
AA seq
DB search
MSNEAFDGQILSEKLSKLNNSQQSIESLSRWCITHRKKAKQIVETWDKSFNSSQKEQRVS
FLYLANDILQNSRRKGSEFVNEFWKVLPAALKHVYDNGDEYGKKAVTRLVDIWEERKVFG
SRGQGLKDEMLGKNPPPVPVSNGRSSNPIKIVKRDANSVRIKLAVGALPEKILTAFQSVL
DEHPNEEVALNNCNAAVHHVGKVSEDVENTPSQGNQHGSASVDQLQEQENVLQECVRQME
SAETTRAALVFQLKEALHDQESKLELIRTKLQVARGQIERASATRKRLTNPLVPGLPSTS
IAQGMEATRGAEPILPSVPPTSIPPQPSVNQPVISFAPLKTTEEENKKAAAAAVAAKLAA
STSSAQMLTSVLSSLVAEEAAKNGSLNSGGFTAGLSIFPPEKRPKLEKSTTASDVSTSDV
ANTTYFSPLQQQQVTNMPVVQSTSMQPMSQVSQIQSQFAPAPPPPPPLSPATPPSSQYVQ
STGMMVGVMPYGFGANTLPPPPPLPPHMAMGLARPSQSLQQPQPQQLQQQQPAATGGYYR
PPGIGFYGQSQPSTSPVPRQ
NT seq
1683 nt
NT seq
+upstream
nt +downstream
nt
atgagcaacgaagcttttgacggacagatattgtctgagaagttgtcaaaacttaacaat
tcgcaacaaagcattgaatcattgtcccgatggtgtattactcaccggaagaaggcaaaa
cagattgttgaaacatgggataaatcattcaactcttcccagaaagagcagcgagtttct
ttcctgtatttagctaatgacattttgcaaaatagtaggcgaaagggcagtgagtttgtg
aatgagttttggaaagttcttcctgcagcactcaaacatgtttatgacaatggtgatgaa
tatggaaagaaagcagtgaccagattggttgacatatgggaagaaagaaaagtttttggt
tcacgagggcaaggtcttaaagatgaaatgctgggtaagaatcctcctcctgttccggtg
agcaatggaaggagctcaaatcctatcaagatagtgaagagggatgctaattctgtgaga
attaaattggctgttggggctctgccagaaaaaatactcactgcctttcaatctgtactc
gatgaacatccgaatgaggaagttgctttaaataactgtaatgctgctgtacatcacgtg
gggaaagttagtgaagatgttgaaaatactccatctcaaggaaatcagcatggatctgca
tcggtggatcagctgcaagagcaggaaaatgtcctccaggaatgtgtcagacaaatggaa
agtgctgaaacaacaagggctgccttggttttccagcttaaagaagcacttcatgaccaa
gaatcgaagcttgagcttatccgcactaagttgcaagttgcccgaggccaaattgagcga
gctagtgccacgaggaaaaggctgacaaacccccttgttccaggtcttccatcaaccagc
attgcccagggaatggaggccacaagaggggcagaacctatccttccatcagttccgcca
acaagcattccacctcaaccttctgttaaccaaccagtgatttcatttgccccactgaaa
actacagaggaagagaacaagaaagcagcagcagctgctgtcgcagctaaacttgctgcc
tctacatcctctgctcaaatgcttacctctgttctgtcatctctcgttgcagaagaagct
gccaagaatggtagcttaaactctggtggatttacggcagggttgtccatattccctccg
gaaaaacggcccaaacttgagaaatcaacgaccgcttctgatgtcagcacttctgatgtg
gccaatacaacctattttagccccttacaacagcaacaagtaaccaatatgccagttgta
caatctacgagtatgcaacccatgtcccaagtgagccagatccaatctcaattcgctcca
gctccaccacctcctccaccactctcaccagctactccaccttcgagtcagtatgttcag
tctactggtatgatggttggggttatgccatatgggtttggagcaaatacactgccaccg
ccaccgcctctgcctccccatatggcaatgggtttagcaagaccctctcagtcattacaa
cagcctcagccacagcaactgcaacagcagcagccggcagcaacaggaggatattaccgg
ccaccaggcattggtttctacgggcaaagccagccttcaacgtcccctgtacctcggcag
taa
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